Protein Info for CA264_00090 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: histidine kinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 907 transmembrane" amino acids 6 to 24 (19 residues), see Phobius details amino acids 36 to 56 (21 residues), see Phobius details amino acids 68 to 86 (19 residues), see Phobius details amino acids 113 to 134 (22 residues), see Phobius details amino acids 158 to 175 (18 residues), see Phobius details amino acids 188 to 214 (27 residues), see Phobius details amino acids 242 to 260 (19 residues), see Phobius details amino acids 280 to 305 (26 residues), see Phobius details amino acids 330 to 355 (26 residues), see Phobius details amino acids 381 to 401 (21 residues), see Phobius details amino acids 407 to 434 (28 residues), see Phobius details amino acids 441 to 467 (27 residues), see Phobius details amino acids 496 to 518 (23 residues), see Phobius details PF00512: HisKA" amino acids 675 to 741 (67 residues), 61.1 bits, see alignment 8.4e-21 PF02518: HATPase_c" amino acids 788 to 899 (112 residues), 106.5 bits, see alignment E=1.1e-34

Best Hits

KEGG orthology group: None (inferred from 52% identity to pol:Bpro_4149)

Predicted SEED Role

"Serine phosphatase RsbU, regulator of sigma subunit" in subsystem SigmaB stress responce regulation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YM79 at UniProt or InterPro

Protein Sequence (907 amino acids)

>CA264_00090 histidine kinase (Pontibacter actiniarum KMM 6156, DSM 19842)
MNYWLVIGVSFLYLALLFGLASWAERRSAAGKSFVGNPYVYALSMAVYCTAWTYYGSVGR
AATSGLEYLAIYVGPTLMAPLWWVVLRKIIRICKVQRITTIADFISSRYGKSITLGSLVT
VVCVLGIIPYISIQLKAIASSLSILTGTAIQQEAFPDTSFFIAIGLGLFTIVYGTRHIEA
TERHEGMVAAIAFESVLKLVVFILAGVFVTYVVFNGFDDVMARAQALPNFNRLMTFSGEG
GFGEWFWMIFLSMLAILFLPRQFQVAVVENVNEQHLNKAMWLFPLYLFAINVFVLPIALG
GDLLFAPGAFDADMFVLAIPLSEGQSLLALLVYLGGYSAATSMVIVATIALSVMMSNNLV
MPLMIGTPYFKTANQDRLTRILLYSRRLCIMAVLLLAYLYYKGVAEYYSLVEVGLVSFAA
VAQFAPAMIGGIFWKEGTKGGALAGIVVGSLVWFYTLVVPSIVGVGMLPTSVMSNGPLGI
GWLKPFALFGLEGMGYISHAMFWTMFLNTGLYIGVSLLSQQTSQERNQAEVFVDIFRYSM
VYESSIVWKGTAYIPDIKSLLVSFLGEQRTDKALSSFRRKYPAPEDATGKADPKLVTYAE
KLLSGVIGSSSAHIMVASVVKEEEISIDEVLNILRESQQLISINNELRRKSMELRRATEQ
LRSANERLKLLDELKDDFLSTVTHELRTPLTSIRALSEILYDNPEMERSDQEHFLHTIVK
ESERLTRLITHVLDLERFESGRQKLNLEPVQLKEVIQESVEALAQLVQEKQIELVVDVQH
SLPSINADRDRLIQVLVNLISNAIKFCSPENGRIIVSAYYIDGNVKVNVVDNGKGIDAES
QKQVFDKFYQAKHQNIRKPEGSGLGLAISKKIIESHQGRLWVESEPGKGARFSFTLPVRV
AAPAAKV