Protein Info for BNILDI_22945 in Escherichia coli ECRC62

Name: yaiI
Annotation: YaiI/YqxD family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 152 PF02639: DUF188" amino acids 17 to 143 (127 residues), 165 bits, see alignment E=3.5e-53

Best Hits

Swiss-Prot: 100% identical to YAII_ECOL5: UPF0178 protein YaiI (yaiI) from Escherichia coli O6:K15:H31 (strain 536 / UPEC)

KEGG orthology group: K09768, hypothetical protein (inferred from 100% identity to eco:b0387)

Predicted SEED Role

"Protein YaiI" in subsystem CBSS-562.2.peg.5158 SK3 including

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (152 amino acids)

>BNILDI_22945 YaiI/YqxD family protein (Escherichia coli ECRC62)
MTIWVDADACPNVIKEILYRAAERMQMPLVLVANQSLRVPPSRFIRTLRVAAGFDVADNE
IVRQCEAGDLVITADIPLAAEAIEKGAAALNPRGERYTPATIRERLTMRDFMDTLRASGI
QTGGPDSLSQRDRQAFAAELEKWWLEVQRSRG