Protein Info for BNILDI_15585 in Escherichia coli ECRC62
Annotation: maltose ABC transporter substrate-binding protein
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
KEGG orthology group: K10108, maltose/maltodextrin transport system substrate-binding protein (inferred from 99% identity to sbc:SbBS512_E2135)Predicted SEED Role
"Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE" in subsystem Bacterial Chemotaxis or Maltose and Maltodextrin Utilization
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (410 amino acids)
>BNILDI_15585 maltose ABC transporter substrate-binding protein (Escherichia coli ECRC62) MKLSNIVTVIILAISSTLTPQAMAEKLIPETDAELLVWSDATSAEYMKYAAKEFNKDFGY KVKFTFRNIAPMDAASRIMQDGGTTRVADVAEIEHDTLGWLVVAGGVMENMVSAERIKKT FIPGAVSAATYNNISYGFPVSFATLALFYNKDLLNTAPKTFEEINTFSEKFNNSSEHKYA LLWDVQNYYVSRMFITLYGANEFGKTGNDPKALGIASSEAKKGLETMKRLKKANPSNPLD MGNPQVLRGLFNEGKVAAVIDGPWSIQGYIDSGINFGVTRIPTLDGHQPRTFSTVRLAVV SSFTEYPHAAELFADYLTTDKMLMKRYEMTNLIPPINSLMNKISQTGSEAIKAIIAQANY SDAMPSIPEMSYLWSPMTNAILATWVENKTPDEVLNHAQTIIEEQLSLQE