Protein Info for BNILDI_10335 in Escherichia coli ECRC62

Name: lplT
Annotation: lysophospholipid transporter LplT

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 397 transmembrane" amino acids 20 to 41 (22 residues), see Phobius details amino acids 53 to 72 (20 residues), see Phobius details amino acids 91 to 116 (26 residues), see Phobius details amino acids 138 to 158 (21 residues), see Phobius details amino acids 164 to 184 (21 residues), see Phobius details amino acids 222 to 245 (24 residues), see Phobius details amino acids 257 to 277 (21 residues), see Phobius details amino acids 285 to 302 (18 residues), see Phobius details amino acids 308 to 329 (22 residues), see Phobius details amino acids 349 to 370 (22 residues), see Phobius details amino acids 374 to 393 (20 residues), see Phobius details PF07690: MFS_1" amino acids 20 to 350 (331 residues), 62.4 bits, see alignment E=1.9e-21

Best Hits

Swiss-Prot: 100% identical to LPLT_ECOLC: Lysophospholipid transporter LplT (lplT) from Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks)

KEGG orthology group: K08227, MFS transporter, LPLT family, lysophospholipid transporter (inferred from 100% identity to eco:b2835)

MetaCyc: 100% identical to lysophospholipid transporter (Escherichia coli K-12 substr. MG1655)
TRANS-RXN-294; TRANS-RXN-295; TRANS-RXN-387

Predicted SEED Role

"Lysophospholipid transporter LplT"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (397 amino acids)

>BNILDI_10335 lysophospholipid transporter LplT (Escherichia coli ECRC62)
MSESVHTNTSLWSKGMKAVIVAQFLSAFGDNALLFATLALLKAQFYPEWSQPILQMVFVG
AYILFAPFVGQVADSFAKGRVMMFANGLKLLGAASICFGINPFLGYTLVGVGAAAYSPAK
YGILGELTTGSKLVKANGLMEASTIAAILLGSVAGGVLADWHVLVALAACALAYGGAVVA
NIYIPKLAAARPGQSWNLINMTRSFLNACTSLWRNGETRFSLVGTSLFWGAGVTLRFLLV
LWVPVALGITDNATPTYLNAMVAIGIVVGAGAAAKLVTLETVSRCMPAGILIGVVVLIFS
LQHELLPAYALLMLIGVMGGFFVVPLNALLQERGKKSVGAGNAIAVQNLGENSAMLLMLG
IYSLAVMVGIPVVPIGIGFGALFALAITALWIWQRRH