Protein Info for BNILDI_04440 in Escherichia coli ECRC62

Name: yieF
Annotation: class I chromate reductase YieF

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 188 PF03358: FMN_red" amino acids 6 to 148 (143 residues), 150.3 bits, see alignment E=3.3e-48 PF02525: Flavodoxin_2" amino acids 18 to 117 (100 residues), 36.9 bits, see alignment E=3.3e-13

Best Hits

Swiss-Prot: 100% identical to CHRR_ECOLI: Quinone reductase (chrR) from Escherichia coli (strain K12)

KEGG orthology group: None (inferred from 100% identity to eco:b3713)

MetaCyc: 100% identical to quinone reductase (Escherichia coli K-12 substr. MG1655)
NAD(P)H dehydrogenase (quinone). [EC: 1.6.5.2]; RXN0-3381 [EC: 1.6.5.2]

Predicted SEED Role

"FIG00553873: hypothetical protein"

MetaCyc Pathways

Isozymes

Compare fitness of predicted isozymes for: 1.6.5.2

Use Curated BLAST to search for 1.6.5.2

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (188 amino acids)

>BNILDI_04440 class I chromate reductase YieF (Escherichia coli ECRC62)
MSEKLKVVTLLGSLRKGSFNGMVARTLPKIAPASMEVNALPSIADIPLYDADVQQEEGFP
ATVEALAEQIRQADGVVIVTPEYNYSVPGGLKNAIDWLSRLPDQPLAGKPVLIQTSSMGV
IGGARCQYHLRQILVFLDAMVMNKPEFMGGVIQNKVDPQTGEVIDQGTLDHLTGQLTAFG
EFIQRVKI