Protein Info for BNILDI_02875 in Escherichia coli ECRC62

Name: yhhW
Annotation: quercetin 2,3-dioxygenase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 231 PF02678: Pirin" amino acids 7 to 119 (113 residues), 130 bits, see alignment E=5.5e-42 PF07883: Cupin_2" amino acids 48 to 114 (67 residues), 27.3 bits, see alignment E=3.5e-10 PF17954: Pirin_C_2" amino acids 143 to 228 (86 residues), 104.1 bits, see alignment E=5.4e-34

Best Hits

Swiss-Prot: 100% identical to YHHW_ECOLI: Quercetin 2,3-dioxygenase (yhhW) from Escherichia coli (strain K12)

KEGG orthology group: K06911, (no description) (inferred from 100% identity to eco:b3439)

MetaCyc: 100% identical to quercetin 2,3-dioxygenase (Escherichia coli K-12 substr. MG1655)
Quercetin 2,3-dioxygenase. [EC: 1.13.11.24]

Predicted SEED Role

"Qercetin 2,3-dioxygenase"

MetaCyc Pathways

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.13.11.24

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (231 amino acids)

>BNILDI_02875 quercetin 2,3-dioxygenase (Escherichia coli ECRC62)
MIYLRKANERGHANHGWLDSWHTFSFANYYDPNFMGFSALRVINDDVIEAGQGFGTHPHK
DMEILTYVLEGTVEHQDSMGNKEQVPAGEFQIMSAGTGIRHSEYNPSSTERLHLYQIWIM
PEENGITPRYEQRRFDAVQGKQLVLSPDARDGSLKVHQDMELYRWALLKDEQSVHQIAAE
RRVWIQVVKGNVTINGVKASTSDGLAIWDEQAISIHADSDSEVLLFDLPPV