Protein Info for BNILDI_00560 in Escherichia coli ECRC62

Name: sslE
Annotation: lipoprotein metalloprotease SslE

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1520 signal peptide" amino acids 1 to 27 (27 residues), see Phobius details PF13322: DUF4092" amino acids 419 to 587 (169 residues), 308.6 bits, see alignment E=2.1e-96 PF17291: M60-like_N" amino acids 1081 to 1165 (85 residues), 45.6 bits, see alignment 9.4e-16 PF13402: Peptidase_M60" amino acids 1173 to 1465 (293 residues), 125.5 bits, see alignment E=4.3e-40

Best Hits

Swiss-Prot: 95% identical to ACFD_ECOH1: Putative lipoprotein YghJ (yghJ) from Escherichia coli O78:H11 (strain H10407 / ETEC)

KEGG orthology group: K10939, accessory colonization factor AcfD (inferred from 92% identity to eco:b4466)

Predicted SEED Role

"Accessory colonization factor AcfD precursor"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1520 amino acids)

>BNILDI_00560 lipoprotein metalloprotease SslE (Escherichia coli ECRC62)
MNKKFKYKKLLLAAILSATLLAGCDGGGSGSSSDTPPVDSGTGSLPEVKPDPTPNPEPTP
EPTPDPEPTPEPTPDPEPTPEPEPEPVPTKTGYLTLGGSLRVTGDITCNDESSDGFTFTP
GDKVTCVAGNNTTIATFDTQSEAARSLRAVEKVSFSLEDAQELAGSDNKKSNALSLVTSM
NSCPANTEQVCLEFSSVIESKRFDSLYKQIDLAPEEFKKLVNEEVENNAATDKAPSTHTS
PVVPATTPGTKPDLNASFVSANAEQFYQYQPTEIILSEGRLVDSQGDGVVGVNYYTNSGR
GVTGENGEFSFSWGETISFGIDTFELGSVRGNKSTIALTELGDEVRGANIDQLIHRYSKA
GQNHTRVVPDEVRKVFAEYPNVINEIINLSLSNGATLGEGEQVVNLPNEFIEQFKTGQAK
EIDTAICAKTDGCNEARWFSLTTRNVNDGQIQGVINKLWGVDTNYKSVSKFHVFHDSTNF
YGSTGNARGQAVVNISNAAFPILMARNDKNYWLAFGEKRAWDKNELAYITEAPSIVRPEN
VTRETATFNLPFISLGQVGDGKLMVIGNPHYNSILRCPNGYSWNGGVNKDGQCTLNSDPD
DMKNFMENVLRYLSNDRWLPDAKSSMTVGTNLDTVYFKKHGQVLGNSAPFAFHKDFTGIT
VKPMTSYGNLNPDEVPLLILNGFEYVTQWGSDPYSIPLRADTSKPKLTQQDVTDLIAYMN
KGGSVLIMENVMSNLKEESASGFVRLLDAAGLSMALNKSVVNNDPQGYPDRVRQRRSTPI
WVYERYPAVDGKPPYTIDDTTKEVIWKYQQENKPDDKPKLEVASWQEEVEGKQVTQFAFI
DEADHKTPESLAAAKQRILDAFPGLEVCKDSDYHYEVNCLEYRPGTGVPVTGGMYVPQYT
QLDLGADTAKAMLQAADLGTNIQRLYQHELYFRTNGLQGERLNSVDLERLYQNMSVWLWN
ETKYRYEEGKEDELGFKTFTEFLNCYTNNAYVGTQCSAELKKSLIDNKMIYGEESSKAGM
MNPSYPLNYMEKPLTRLMLGRSWWDLNIKVDVEKYPGAVSEEGQNVTETISLYSNPTKWF
AGNMQSTGLWAPAQKEVTIKSNANVPVTVTVALADDLTGREKHEVALNRPPRVTKTYSLD
ASGTVKFKVPYGGLIYIKGDSKDNESASFTFTGVVKAPFYKDGAWKNDLNSPAPLGELES
DAFVYTAPKKNLNASNYTGGLKQFANDLDTFASSMNDFYGRNEEDGKHRMFTYKNLTGHK
HRFANDVQISIGDAHSGYPVMNSSFSTNSTTLPTTPLNDWLIWHEVGHNAAETPLTVPGA
TEVANNVLALYMQDRYLGKMNRVADDITVAPEYLEESNGQAWARGGAGDRLLMYAQLKEW
AEKNFDIKKWYPEGELPKFFSDREGMKGWNLFQLMHRKARGDDVGDKTFGGKNYCAESNG
NAADTLMLCASWVAQTDLSEFFKKWNPGANAYQLPGASEMSFEGGVSQSAYNTLASLKLP
KPEQGPETINKVTEHKMSVE