Protein Info for BACOVA_04950 in Bacteroides ovatus ATCC 8483

Annotation: glycosyl hydrolase family 2, sugar binding domain protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF02837: Glyco_hydro_2_N
  • amino acids 35 to 213 (179 residues), 55.7 bits, E=6.2e-19
• PF00703: Glyco_hydro_2
  • amino acids 231 to 337 (107 residues), 50.6 bits, E=3.1e-17

Best Hits

KEGG orthology group: None (inferred from 89% identity to bth:BT_4151)

Predicted SEED Role

"Beta-galactosidase (EC 3.2.1.23)" in subsystem Galactosylceramide and Sulfatide metabolism or Lactose and Galactose Uptake and Utilization or Lactose utilization (EC 3.2.1.23)

MetaCyc Pathways

• lactose degradation III (1/1 steps found)
• xyloglucan degradation II (exoglucanase) (5/8 steps found)

KEGG Metabolic Maps

• Galactose metabolism
• Glycosaminoglycan degradation
• Glycosphingolipid biosynthesis - ganglio series
• Other glycan degradation
• Sphingolipid metabolism

Isozymes

Compare fitness of predicted isozymes for: 3.2.1.23

Use Curated BLAST to search for 3.2.1.23

Protein Sequence (967 amino acids)

>BACOVA_04950 glycosyl hydrolase family 2, sugar binding domain protein (Bacteroides ovatus ATCC 8483)
MKNISTLYIMKRLLVSIAIVFISILTVAGQNHSFSLSGKWNFQIDREDTGVKEQWFKKSL
DDSINLPGSMPEKLKGDEVTVRTQWTGSLYDSSYYFNPYMEKYRIEGQVKLPFFLTPDKH
YVGVAWYQKKVTIPADWKGERITLFLERPHIETTVWVNQQELGMQNSLCVPHVYDLTAAT
TPGKTYLITIRIDNRIKEINVGPDSHSITDQTQGNWNGIVGRIELQATPKVHLEDIQVYP
DLSNQKALVRMNIRSASSTKGEITLSAASFNTDIQHKVAPVHQSFNIRPGDNPVEMELPM
GKEFLTWDEFSPALYKLTAKLTNGKQTDTQQVQFGMRDFKIEGKWFYVNGRKTMLRGTVE
NCDFPLTGYAPMDVASWERVFRICRNYGLNHMRFHSFCPPEAAFIAADLVGFYLQPEGPS
WPNHGPRLGNGQPIDKYLMDETIALTKEYGNYASYCMLACGNEPSGRWVAWVSKFVDYWK
ATDPRRVYTGASVGNSWQWQPHNEYHVKAGARGLSWAGAQPESESDYRARIDTVKQPYVS
HETGQWCVFPNFNEIRKYTGVNKAKNFEIFRDILNDNHMGSQSHDFMMASGKLQALCYKH
EIEKTLRTPDYAGFQLLALNDYSGQGTALVGVLDVFFEEKGYINAEQFRRFCSPTVPLAR
IPKFVYANNETFHADIEVSHFGAAPLESAKTVYTIKDKFGKVYAHGTVGTHHIPIGNLYS
LGSVDMTLEGIDTQQKLNLEVRIEGCDAVNDWDFWVYPAQVELVQGTVYTTDTLDAKALA
VLQDGGNVLITAAGKIQYGKEVKQYFTPVFWNTSWFKMRPPHTTGIFLNEYHPLFREFPT
EYHSNLQWWELLNKAQVMQFTDFPATFQPTVQSIDTWFISRKIGMLFEAKVLNGKLMMTS
MDITSQPEKRIVARQMHKAILNYMNSDAFRPADKIAPELIQALFTKVAGDVKSYTKDSPD
ELKPKIN