Protein Info for BACOVA_04701 in Bacteroides ovatus ATCC 8483

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 255 transmembrane" amino acids 116 to 133 (18 residues), see Phobius details amino acids 139 to 157 (19 residues), see Phobius details amino acids 169 to 189 (21 residues), see Phobius details amino acids 195 to 217 (23 residues), see Phobius details amino acids 229 to 250 (22 residues), see Phobius details PF06738: ThrE" amino acids 13 to 248 (236 residues), 178.9 bits, see alignment E=1.2e-56

Best Hits

KEGG orthology group: None (inferred from 60% identity to bth:BT_0975)

Predicted SEED Role

"Probable integral membrane protein Cj1166c"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (255 amino acids)

>BACOVA_04701 hypothetical protein (Bacteroides ovatus ATCC 8483)
MKTQQELCDILGFIAEYATYQLGSGVHTSRAVRNSRRIGEALGVDVQLSSFQKSTILTVL
DLGSGESATRVVAIPSLPISFERNSDLSALSWDALDEGLSLDEIRSRYRTLVDKPRMDPI
FTLVFVGLANASFCKLFGGDWTAVGIVFTATLVGFAVKQRMQAHAVNHFLVFACSAFVAS
LCATAALRFDCTAEITLATSPLFLVPGVPLINGVIDIMEGHVLMGVSRLVNAMLLIVCIA
VGLSATLLMVKDSLL