Protein Info for BACOVA_04237 in Bacteroides ovatus ATCC 8483

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1005 signal peptide" amino acids 1 to 26 (26 residues), see Phobius details

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1005 amino acids)

>BACOVA_04237 hypothetical protein (Bacteroides ovatus ATCC 8483)
MKKKFVRVMLFGALTLTVSTVVTSCKDYDDDIKGLQEQVDKITSTSPVSTEDMKSAVEKA
KQDLQTQLNDLSALVKNPDGEETLKQKIAALEKALADATGDKAKDLAARLTDLQNQLTSL
QKILKGEDGVSGLEKKITELEDAKTVLSELIAAEQAYITSGKKNVSAYESTSFGAYVNQA
IIDALKHDGTDQDKWGEIAKYVTGAVQSGITTELGNINAVLTEKYGVSTTLATFVGNVYD
KLFSDDAKAQQAQLNELLTAINAYVAKTEGADYENYAALIKQIVDAQKAVAALNMPEGTA
TLDEGVKALIADEKSAVNQAIKDLTDHLQKEIDAIKGMIQSIVYVPTYADGQVQFNTYYV
DFATGGGHDWKSVVNVNEVAVRFRVSPADVIKDLVACYGENGEVSENAKYVISVDCQKVK
TRSLNDPFKIKGIKVVDAEPNLIEVTLDASAVKNSYAVALTVTDKVAADKKTLNDVSSNY
FAAVKSNLYISKVEWASANAGVATVKKGASIDYKENDGDAKVSDYNVTVNTAIKANGDVD
GTPDTKTLSELGISDKYFSVAFSTTANVAANFDLNAETGVLKAKGDAGSQATVQSIVTVT
DPATAGEEHPTTKVYDAKEYTEVKIVSEGQAQTATLASTDPILWNAAEKMYNIATTGDAV
AVITAIKTALGNASMSDFSGCTFEGVSQDQTIKLGLNGSDQLALVVPANTTCEATDITTK
ITKGDYTVDVTVKGVTVTLPKETDAAFKLEAITQTDGTLLTNFAKDVSSKITAVTASRSL
KELYSNYDAVYGKLVTDMGGTMKFALAANTQKAAPASRGVTVNENDGTVTVTNQYDGEPI
NVTLQGKCDENVIFTETIPVIIPAANLNGTFSYKDAETTEFDYDVTDENARKAGFDLTTA
FIWKDKNSKDVWPTFATDTYASDAMTIYGFSIEYSLSGNDASSFVKPTISDNKLKLTDAM
AKLSMNNANLVVTVKATPTSPWGSMVGQAKTITVKVSTWVDDTTN