Protein Info for BACOVA_03454 in Bacteroides ovatus ATCC 8483

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 371 transmembrane" amino acids 9 to 28 (20 residues), see Phobius details amino acids 52 to 69 (18 residues), see Phobius details amino acids 89 to 109 (21 residues), see Phobius details amino acids 121 to 139 (19 residues), see Phobius details amino acids 146 to 166 (21 residues), see Phobius details amino acids 197 to 218 (22 residues), see Phobius details amino acids 230 to 247 (18 residues), see Phobius details amino acids 258 to 278 (21 residues), see Phobius details amino acids 298 to 318 (21 residues), see Phobius details amino acids 344 to 363 (20 residues), see Phobius details PF07786: HGSNAT_cat" amino acids 8 to 220 (213 residues), 32.3 bits, see alignment E=7.4e-12 PF16401: DUF5009" amino acids 10 to 173 (164 residues), 26.1 bits, see alignment E=6.1e-10

Best Hits

KEGG orthology group: None (inferred from 77% identity to bth:BT_3619)

Predicted SEED Role

"N-acetylglucosamine related transporter, NagX" in subsystem Chitin and N-acetylglucosamine utilization

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (371 amino acids)

>BACOVA_03454 hypothetical protein (Bacteroides ovatus ATCC 8483)
MNTTSNKRLLALDVMRGITIAGMILVNNPGSWGHAYAPLKHAQWNGLTPTDLVFPFFMFI
MGISTYISLKKYNFTFSTPAALKIIKRTIVIFLIGIALNWFALLCYTHNPLPFEQIRILG
VMQRLALCYGASALIALLLKHKYIPYLIVVLLVGYFIILITGNGFAYNETNILSIVDRSI
LGDAHMYQDNHIDPEGLLSTIPSIAHVLIGFCVGKLLMEVKDIHEKLERLFLIGTILTFA
GFLFSYGCPFNKKIWSPTFVLVTCGLGSSLLALLVWIIDIKGCKKWSRFFESFGVNPLFI
YVMAGVIAVLVGAITVTYQGESVPIQQVVYRCALQPVFGDEGGSLAYAILFVLLNWSIGY
ILYKKKIYIKI