Protein Info for BACOVA_03423 in Bacteroides ovatus ATCC 8483

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 666 signal peptide" amino acids 1 to 39 (39 residues), see Phobius details PF14508: GH97_N" amino acids 43 to 306 (264 residues), 191.7 bits, see alignment E=2.1e-60 PF10566: Glyco_hydro_97" amino acids 320 to 574 (255 residues), 237.6 bits, see alignment E=2.7e-74 PF14509: GH97_C" amino acids 576 to 664 (89 residues), 58 bits, see alignment E=1.4e-19

Best Hits

KEGG orthology group: None (inferred from 69% identity to fjo:Fjoh_3873)

Predicted SEED Role

"Beta-xylosidase (EC 3.2.1.37)" in subsystem Xylose utilization (EC 3.2.1.37)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.2.1.37

Use Curated BLAST to search for 3.2.1.37

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (666 amino acids)

>BACOVA_03423 hypothetical protein (Bacteroides ovatus ATCC 8483)
MIVIESVIMSVEKNLKSRNMMKFFIVMAMLLGSSVASAENKQITSPDGKLVVTVADMDGR
PSYSVSYDNVLFLKPSPLGIIANIGDFSSGMSLEKNVSTNKIDETYELASIKKSKVHYVA
NEAVFSFTQQGKTIYDVIFRISNNDVAFKYKMYPQGETLSCVVKQEVTGFVFPDGTTTFL
CPQSKPMGGFARTSPSYETSYTADDVAGKNGWGEGYTFPCLFRNGDNGWTLVSETGVNGG
YCASRLLGHKEGVYTIGFPQEGEANGNGTVSPGIALPGETPWRTITVGKTLAPIVETTVP
FDVVKPLYQAKGEYTYGRGSWSWIIGMDGSTNYKEQLRYIDFSAAMGYQSVLVDALWDKQ
IGRDKIEELVKYGKDKGVALYLWYNSNGYWNDAPQTPRGIMDNAIARRKEMKWMQSIGIR
GIKVDFFGGDKQMTMQLYEDILSDANEYGLLVIFHGCTLPRGWERMYPNFASSEAVLASE
NLHFSQGSCDNEAFNATLHPFIRNTVGSMDFGGSALNKYYNADNAPRGSRRVTSDVYALA
TAVLFQSPVQHFALAPNNLTDAPSWAIDFMKEVPTTWDEVRFIDGYPGKYVILARRHGDK
WYIAGVNAQKETLKLKVNLPMFSNGEKVRLFSDDKVLQGGVKQIEIGKKQELQLAIPCNG
GVLITK