Protein Info for BACOVA_03360 in Bacteroides ovatus ATCC 8483

Annotation: peptidase M16 inactive domain protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1028 transmembrane" amino acids 28 to 51 (24 residues), see Phobius details amino acids 63 to 81 (19 residues), see Phobius details PF00675: Peptidase_M16" amino acids 110 to 158 (49 residues), 27.4 bits, see alignment 3e-10 PF05193: Peptidase_M16_C" amino acids 311 to 483 (173 residues), 84.6 bits, see alignment E=8.4e-28

Best Hits

KEGG orthology group: None (inferred from 92% identity to bth:BT_3551)

Predicted SEED Role

"peptidase M16 domain protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1028 amino acids)

>BACOVA_03360 peptidase M16 inactive domain protein (Bacteroides ovatus ATCC 8483)
MSKIPPQRISALFHVFKLFNSNHLIYNFIIYKFQISGTKISKILLPLFLLLKCCHIMNKR
LKLSCLSLFLALVICSCSSQKKYSYETVPNDPLKARIYTLDNGLKVYLTVNKETPRIQTF
IAVRVGGKNDPAETTGLAHYFEHLMFKGTDKFGTQDYAAEKPLLDAIEQQFEIYRKTTDE
AERKAIYHTIDSLSYEASKYAIPNEYDKLMAAIGSTGSNAYTWYDQTVYQEDIPSNQIDN
WAKIQADRFENNVIRGFHTELEAVYEEKNMSLTRDNSKVQEAIFSSLFPKHPYGTQTVLG
TQENLKNPSITNIKNYYKQWYVPNNMAICMSGDLDPDATIALIDKYFGGLKPNPELPKLD
LPKEAPITQPVVKEVLGPDAESVALAWRFPGVSDKDFEILQVVSQVLYNGKAGLIDLDLN
QQQKVLNSYGYPMGLADYSALLLGGLPKQGQTLEEVKDLLLSEIKKLRAGEFDEKMLEAN
INNFKLGELQNMESNEGRADMFVNSFINGTDWKNEVTAIDRMAKLTKEDIVAFANKYLKE
DNYAVIYKKQGKDPNEKKMTKPEITPIITNRDVASPFLVEVQESAVKPIEPVFLDYQKDM
SQLKAKSDIPVLYKQNVANDLFQLIYVFDMGNNHDKALGTAFDYLEYLGTSDMTPEELKS
EFYRLACTFYVSPGNERTYVVLSGLNENMPAAVQLFEKLLADAQVNKEAYTNMTSDILKA
RSDAKLNQGQNFSRLMSFAMYGPKSPATNLLTEAELTNMNPQELVDRIHNQNSYKHRILY
YGPSSSKDLLATINQYHQVPAALKDIPAGNEYSYLETPVTKVLVAPYDAKQIYMAQISNL
DKKYDPAIEPIRALYDEYFGGGMNSIVFQEMRETRGLAYSAWASIMPPSYLKYPYVLRTQ
IATQNDKMIDAVTTFNDIINNMPESEAAFKLAKDGLTNRLRTERIIKGDIIWSYINAQDL
GQNVDPRIKLYNDIQNMSLKDIVDFQKQWVKGRTYVYCILGDKKDLELDKLKAVGPIEEL
TQEQIFGY