Protein Info for BACOVA_03013 in Bacteroides ovatus ATCC 8483

Annotation: IS66 family element, transposase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 537 PF13007: LZ_Tnp_IS66" amino acids 58 to 145 (88 residues), 46.5 bits, see alignment E=7.7e-16 PF03050: DDE_Tnp_IS66" amino acids 205 to 486 (282 residues), 296.7 bits, see alignment E=3e-92

Best Hits

KEGG orthology group: None (inferred from 94% identity to bvu:BVU_1179)

Predicted SEED Role

"Mobile element protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (537 amino acids)

>BACOVA_03013 IS66 family element, transposase (Bacteroides ovatus ATCC 8483)
MKEPVITLTLEEYEELRKERERLEKEHAELQRKYESSLREYSRQVEEISACTAVIADLRW
KLADLTRRLWGKSSEKRHLPEDAGQLSICFESPSDVNDPVAEEQKTAEKSAKSENGYNRF
RKSFTKKITPHARKPIDPSLPREEIIIPMPEGLSLEGAAKLGEEVSEQYAVSPARFYVRR
IIRPKYRLADGRIITAPMPVMAHPHSNASESVLSHIATAKYYDHLPLYRQLDIFEREGIH
LSPSTVSNWMMAAAQRLEPIYNELRELVKDSYYVMADETPHPVLESDRPGALHRGYMWNF
YLPRFHTPFFEYHKGRGSSGIDTLLAGQVRMVQSDGFAVYDEFDTLPGKLHLCCWAHVRR
KFVEAEGNDPPRARHALEQIGRLYAVEEKIRIGHLEGGAVVRLRREESYPIIKGLEKWCR
QEYEHTVEKSPIAKAIFYMYTRFEQLSGYVNDAQFCIDNNPVERSIRPLTLNRKNTLFSG
SHEAAHAAAIFFSLMGCCRENKVNPKLWMQDVLIRVQENEREKKNDYADLLPFNWKG