Protein Info for BACOVA_02913 in Bacteroides ovatus ATCC 8483

Annotation: undecaprenyl-diphosphatase UppP

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 284 transmembrane" amino acids 44 to 65 (22 residues), see Phobius details amino acids 92 to 111 (20 residues), see Phobius details amino acids 117 to 138 (22 residues), see Phobius details amino acids 162 to 172 (11 residues), see Phobius details amino acids 192 to 212 (21 residues), see Phobius details amino acids 228 to 249 (22 residues), see Phobius details amino acids 261 to 281 (21 residues), see Phobius details TIGR00753: undecaprenyl-diphosphatase UppP" amino acids 10 to 268 (259 residues), 231.4 bits, see alignment E=7.1e-73 PF02673: BacA" amino acids 10 to 269 (260 residues), 278.2 bits, see alignment E=3.8e-87

Best Hits

Swiss-Prot: 63% identical to UPPP_PORGI: Undecaprenyl-diphosphatase (uppP) from Porphyromonas gingivalis (strain ATCC BAA-308 / W83)

KEGG orthology group: K06153, undecaprenyl-diphosphatase [EC: 3.6.1.27] (inferred from 84% identity to bsa:Bacsa_2304)

Predicted SEED Role

"Undecaprenyl-diphosphatase (EC 3.6.1.27)" (EC 3.6.1.27)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.6.1.27

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (284 amino acids)

>BACOVA_02913 undecaprenyl-diphosphatase UppP (Bacteroides ovatus ATCC 8483)
MGDLTTFETIIIAIVEGLTEFLPVSSTGHMIITQNILGVESTEFVKAFTVIIQFGAILSV
VCLYWKRFFRLNHTPAPAGASALKCFLHKFDFYWKLLVAFIPAAILGFLFSDKIDEMLES
VAIVAVMLVIGGIFMLFCDKIFSKGSEDTVLTERKAFNIGLFQCIAMIPGVSRSMATIVG
GMAQKLTRKDAAEFSFFLAVPTMFAATGYKVLKLFLDGGTEILVNNMPALIIGNVVAFIV
ALLAIKFFISFVTKYGFKAFGWYRIIVGGTILVMLLLGYNLEIG