Protein Info for BACOVA_02813 in Bacteroides ovatus ATCC 8483

Annotation: hydrolase, alpha/beta domain protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 496 transmembrane" amino acids 31 to 54 (24 residues), see Phobius details amino acids 281 to 296 (16 residues), see Phobius details PF02129: Peptidase_S15" amino acids 181 to 434 (254 residues), 56.3 bits, see alignment E=1.7e-18 PF01738: DLH" amino acids 187 to 311 (125 residues), 31.2 bits, see alignment E=6.9e-11 PF20434: BD-FAE" amino acids 192 to 298 (107 residues), 27 bits, see alignment E=1.2e-09 PF00561: Abhydrolase_1" amino acids 199 to 463 (265 residues), 46.6 bits, see alignment E=1.5e-15 PF12146: Hydrolase_4" amino acids 225 to 462 (238 residues), 57.6 bits, see alignment E=5e-19 PF00326: Peptidase_S9" amino acids 226 to 314 (89 residues), 27.2 bits, see alignment E=1.1e-09 PF08840: BAAT_C" amino acids 265 to 463 (199 residues), 36.8 bits, see alignment E=1.8e-12

Best Hits

KEGG orthology group: K06889, (no description) (inferred from 81% identity to bth:BT_3112)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (496 amino acids)

>BACOVA_02813 hydrolase, alpha/beta domain protein (Bacteroides ovatus ATCC 8483)
MSYFYNDENCYLCIYLIFTIKIKPNFSLMKIVKATYIVIFITGLLAGVFFSSSVSAQDIS
GAWHGKLSLPTGSLTIVFHISQTEQGAYVTTLDSPDQGANGIKTQTTSFNDSTLIIQIPV
IHASYKGKLNSDNTINGTFTQGMPLPLNLKKGEASRPKRPQEPQPPFPYRSEEVTVRNER
DGINLAGTLTLPEKGTKFPAVVMVTGSGAQNRDEEIMGHKPFFVIADYLTRNGIAVLRCD
DRGTAASQGTHATATNEDFATDTEAMVNYLRSRKEINAKKIGIIGHSAGGIIAFIVAKKD
PSIAFVVSLAGAGVRGDSLMLKQVELISKSQGMPDAVWQGMKPSIRNRYAILQQTDKTPE
ELQKELYADVTKTMSPEQLKDLNTIQQLSAQISSMTSPWYLHFMRYDPAQDLKKLKCPVL
ALNGEKDIQVDAAMNLAAIQERITGNGNKNVTVKAYPNLNHLFQTCEKGTLAEYGQLEET
INPEVLKDIIEWIRKQ