Protein Info for BACOVA_02745 in Bacteroides ovatus ATCC 8483

Annotation: glycosyl hydrolase family 3 N-terminal domain protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 764 signal peptide" amino acids 1 to 23 (23 residues), see Phobius details PF00933: Glyco_hydro_3" amino acids 46 to 377 (332 residues), 213.8 bits, see alignment E=6.8e-67 PF01915: Glyco_hydro_3_C" amino acids 415 to 652 (238 residues), 148.6 bits, see alignment E=3.6e-47 PF14310: Fn3-like" amino acids 689 to 756 (68 residues), 67.7 bits, see alignment E=1.2e-22

Best Hits

Swiss-Prot: 62% identical to BGH3B_BACO1: Beta-glucosidase BoGH3B (BACOVA_02659) from Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC 11153)

KEGG orthology group: K05349, beta-glucosidase [EC: 3.2.1.21] (inferred from 79% identity to ppn:Palpr_2557)

Predicted SEED Role

"Beta-glucosidase (EC 3.2.1.21)" in subsystem Beta-Glucoside Metabolism or Fructooligosaccharides(FOS) and Raffinose Utilization (EC 3.2.1.21)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.2.1.21

Use Curated BLAST to search for 3.2.1.21

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (764 amino acids)

>BACOVA_02745 glycosyl hydrolase family 3 N-terminal domain protein (Bacteroides ovatus ATCC 8483)
MKLRNIILMTASIAMTACSKQAVPTAIPEDAKIEQQVEELLSKMDLDAKIGQMTELAIDV
LGETINGEFQLDEAKLHKAIAEYKVGSFLNAPGPVAQSPEKWNEIIGRIQELSMAEIGIP
CIYGLDQNHGTTYTLGGTLFPQNINMGAAFNPDLTYEAARVTAYETRASNCPWTYSPTVD
MARDPRWPRVWENYGEDCLVNAIMGSTAVRGFQGDDPNHIPADRIATSVKHYMGYSMPRT
GKDRTPAYISVSELREKCFAPFRACVEAGALTIMVNSGSINGKPVHADRELLTQWLKEDL
GWDGMLITDWADINNLYTREHVAANKKEAIEMAINAGIDMAMEPYDLNYCTLLKELVQEK
KIPMSRIDDAVRRVLRLKFRLGLFDHPNTLLKDYPLFGSKEHALIALHAAEESEVLLKNK
DNILPLPQGKKLLVTGPNANSMRCLNGGWSYSWQGHLTDRFADKYNTIYEAICNKFGADH
VRLEQGVTYKPEGAYMEENEPEIEKAVAAARNVDIIIACIGENSYCETPGNLSELAISAS
QSKLVKALAATGKPIILILNEGRPRIINELEPLADAVIDILLPGNYGGDALANILAGDVN
PSAKMPYTYPRHEAALTTYDYRVSEEMDKMEGAYDYNAVVSVQWPFGYGLSYTTFEYSNF
QTDKSSFTAGDDLHFSIDVTNTGKYAGKEVVMLFSSDLVASLTPENRRLRAFKKVELQPG
ETQTITLSIKGSDLAFVNSDGQWVLEQGDFRMQCGNQTLNIICK