Protein Info for BACOVA_02740 in Bacteroides ovatus ATCC 8483

Annotation: response regulator receiver domain protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1323 signal peptide" amino acids 1 to 21 (21 residues), see Phobius details transmembrane" amino acids 760 to 778 (19 residues), see Phobius details PF07494: Reg_prop" amino acids 37 to 59 (23 residues), 19.3 bits, see alignment (E = 3.2e-07) amino acids 298 to 319 (22 residues), 18.9 bits, see alignment (E = 4.3e-07) amino acids 557 to 579 (23 residues), 18.8 bits, see alignment (E = 4.6e-07) PF07495: Y_Y_Y" amino acids 689 to 752 (64 residues), 38.6 bits, see alignment 2.9e-13 PF00512: HisKA" amino acids 794 to 857 (64 residues), 42 bits, see alignment 2.8e-14 PF02518: HATPase_c" amino acids 905 to 1015 (111 residues), 86.8 bits, see alignment E=4.9e-28 PF00072: Response_reg" amino acids 1055 to 1164 (110 residues), 86.3 bits, see alignment E=5.7e-28 PF12833: HTH_18" amino acids 1245 to 1320 (76 residues), 68.1 bits, see alignment 2.3e-22 PF00165: HTH_AraC" amino acids 1285 to 1320 (36 residues), 26.8 bits, see alignment (E = 1.6e-09)

Best Hits

Predicted SEED Role

"FIG00938042: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1323 amino acids)

>BACOVA_02740 response regulator receiver domain protein (Bacteroides ovatus ATCC 8483)
MVRFNLVITLLLMISIAVKAELTNRMFDVRHVGYAEGLSSQRVFSIVEDGDGAMWIATKT
GIDRYNGHTVKNYDLPGSFYYGDLAGRRLYLLYDAQQGLFAYDHTGRIYRYSTILDHFEQ
VLHLGQLIQEEVILNKLCLDSDGTWWMGADKGLYKQEADHRIVAVLKGQYVNDIAFAGES
LFVGTSNGVWQLSHALPDKKRQLLEGWNVQTLFCDKPKKELWIGTFGSGLSVMNLDTSKV
LALEGQGSTFLHPIRAITDYDVHTILIGVDGGGVYAIDKDTKKARLLMNTKDDTDTYLRG
NGVYAVTRDDQGNIWIGSYTGGVSVAILLKHPISILAHEKGNTHSLISNNVNDIEENPDG
NQWFATDDGISIRNTLSGTWKHVLKEIVTISLCTSGNGNVWVGTYGDGVYLLDNNGRVLR
HLTKQQGQLTTNYIFSVRQDMEGDLWIGGLDGCLIMFEKEKGSRQSFDVNWVQSIEPIDR
NRVAVATVNGFFLVDKHTGNIQHYANSQEFHNQNVSAYIISMLFNDDGTVWLGTEGGGLN
LYDMKNRTVKTFTVQEGLPSNDIYSLQRDDKKRLWVSTGKGIALIDSLRVSNLNYAGNID
KEYNKSSFARLMNGEFVYGSTDGAVFIMPLDISTVDYWTLLRFTGLTVDYQNVQEEESLR
PAIHDMLADRAVRLGYKYNSFTVSFESINYRFQRDIVYQHILEGYDNDWSKPSAEGKASY
TKVSPGTYLFKVRSLRRSDGKTISESTLEVKVSQPWWNSWWAWTIYLFIIGFVFYFILRY
KSNQLQKKYDEDKIRFFIDTAHDIRTPVTLIMAPLEDLNREQDLSDKARYYLNLAHESTQ
KLHSLITQLLEFEKVDAHKPSSSSVPLCLNEVLLKEVSVFRSFCEKKQLTLNLTQPDESV
FVSADKHLIEMLLDNLLSNACKYTMPQGEISLDLKATKRKAILSLKDNGIGIPKKAKKHI
FSDIYRAENARQSQEEGTGFGLLQVQRIVKMLHGKITFCSEEGKGTTFIVTLPRTTTVAE
PVSHESSLEHLAGTSDNNSPETDKMKDPDDRNTLLIVEDHETLRHYLRQTFEHLYRVIDV
ADGHEAIACLANEYPDIILSDVMMPGIRGDELCRMVKENPDTSGIPVVLLTAKANHEAIV
EGLKKGADDYIPKPFSTEILKLKVQGLIDNRNRQRQFFMRQAIAQVEAGGKRDDNESNEN
NESIDNKNVTTASETMAEGDRRFIMQATRFVLEHLDEPDFNINLLCHEMAMSRTLFYSRL
KSLTGKGPQEFIRIIRLQKAAELLKEGKSVTDVATETGFVNTKYFSSLFKKQFGMQPSKY
SGK