Protein Info for BACOVA_02656 in Bacteroides ovatus ATCC 8483

Annotation: glycosyl hydrolase, family 43

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF04616: Glyco_hydro_43
  • amino acids 2 to 262 (261 residues), 253.2 bits, E=3.3e-79
• PF17851: GH43_C2
  • amino acids 290 to 483 (194 residues), 196.3 bits, E=4.9e-62

Best Hits

Swiss-Prot: 100% identical to GH43B_BACO1: Non-reducing end alpha-L-arabinofuranosidase BoGH43B (BACOVA_02656) from Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC 11153)

Predicted SEED Role

"Beta-xylosidase (EC 3.2.1.37)" in subsystem Xylose utilization (EC 3.2.1.37)

MetaCyc Pathways

• (1,4)-β-D-xylan degradation (2/2 steps found)

KEGG Metabolic Maps

• Nucleotide sugars metabolism
• Starch and sucrose metabolism

Isozymes

Compare fitness of predicted isozymes for: 3.2.1.37

Use Curated BLAST to search for 3.2.1.37

Protein Sequence (486 amino acids)

>BACOVA_02656 glycosyl hydrolase, family 43 (Bacteroides ovatus ATCC 8483)
MGDDFYLVTSTFEYFPGLPVYHSKDLVHWKLIGHALSRPENNPLMGCNASTGGQYAPTLR
YHDGTFYVIGTNYGGKGSQGVFYVTAKNPAGPWSDPVWVGNWYVDPSIEFIDGKMYFLSP
DNQGSFLLGVMDPETGTFVEALRKVASGLGGSSPEGPHFYKIGDYYYIMSAEGGTGYEHR
EVIQRSKSPWGPYEPSPVNPVLSNMNCPDHPFQAIGHADLVQLKDGSWWAVCLGIRPVNG
KYQHLGRETFLAPVTWDADGWPKVGKDGVVQETYLFPNLPSHVWMEQPVRDDFDQETLGL
DWTFIRNPAHSFWSLTEKPGSLRLKGTAINFTTNDSPSFIGRRQAAFNLTASAKVNFIPK
VENEEAGLVVRADDKNHYDLLITERNGQRVAMIRKTLKDKVVDTTCKELPATGEVILSIT
ATETTYTFEIKAAHVSAILGTASTRDVSNEVVGGFTGVFIGMYASGNGQANTNPADFDWF
DFRCLD