Protein Info for BACOVA_02650 in Bacteroides ovatus ATCC 8483

Annotation: IPT/TIG domain protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 489 signal peptide" amino acids 1 to 29 (29 residues), see Phobius details PF01833: TIG" amino acids 232 to 304 (73 residues), 20.5 bits, see alignment E=4e-08 PF18329: SGBP_B_XBD" amino acids 315 to 488 (174 residues), 92.4 bits, see alignment E=3.8e-30

Best Hits

Swiss-Prot: 100% identical to Y2650_BACO1: IPT/TIG domain-containing protein BACOVA_02650 (BACOVA_02650) from Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC 11153)

Predicted SEED Role

"FIG00412418: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (489 amino acids)

>BACOVA_02650 IPT/TIG domain protein (Bacteroides ovatus ATCC 8483)
MKSIYKYLDTRLFLIGLLVLPFLAVVSCQNDDDDAIPVIHYIRVTDPAKADSTFTDVNPG
TMIVVVGEHLGGTQKVYINDQEVSFNRNYVTSTSIILTVPNELELTGQNPELKGEIRIET
EHGVAAYNMHVLSPAPYITRISATYPIKPGDQMTVIGGNFYEVQAVYLSTEQPAKDGTRP
VDVQEITNYEVNNKYSQITLTAPANLLEEGYLVVECYTSSAVTEFKKNGPKPVVTAVSST
MPVVGSTVTITGQNFIEVSRVNINGEFDIPVGDITTSNTFDEISFVLPQAPTQSGHISVT
AIGGTVESAEIFYPLENVILNYDGIGSHVWGDCSFVVADGSSAPYVSNGTCLGITGTVSA
SNYWWKQSYSNAQWVNTSIIPGNIPIDDLKLQFECFVKEVFTGPVFQIAMCENFDAALNG
YVPVSSFTGKTETGKWMQCSVSLSSVVADATYQDFLNRNSTHIGVYATNPGSSQATIEVY
FDNFRIVRK