Protein Info for BACOVA_02481 in Bacteroides ovatus ATCC 8483

Annotation: peptidase M16 inactive domain protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 427 PF00675: Peptidase_M16" amino acids 47 to 142 (96 residues), 31.6 bits, see alignment E=1.5e-11 PF05193: Peptidase_M16_C" amino acids 181 to 356 (176 residues), 121.6 bits, see alignment E=3.7e-39

Best Hits

KEGG orthology group: None (inferred from 89% identity to bth:BT_0746)

Predicted SEED Role

"ZINC PROTEASE (EC 3.4.99.-)" (EC 3.4.99.-)

Isozymes

Compare fitness of predicted isozymes for: 3.4.99.-

Use Curated BLAST to search for 3.4.99.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (427 amino acids)

>BACOVA_02481 peptidase M16 inactive domain protein (Bacteroides ovatus ATCC 8483)
MDRTIQPEIQTLKNFRILPPVRMTLPNGIPLTVINAGEQEVVRIDVLFAGGRWQQSQKLQ
ALFTNRMLREGTKKYTAATIAEKLDYYGSWLELSSSSEYAYITVYSLNKYLAKTLEVVES
MIKEPLFPEKELHTILDTNIQQYLVNTSKVDFLAHRSLLQSLYGEQHPCGRIVVEEDYHA
ITPEVLREFYERYYHSGNCSIFLSGKVTEDIISRVTDTFGTSFGQHQQQVSKLNFPFTAV
PEKRIFTERGDAMQSAVKMGYTTITRDHPDYLKLRVLMTLFGGYFGSRLMSNIREEKGYT
YGISAGIMFYPDSGLLAISTETDNEYVEPLIQEVYHEIDRLHQEPVSAEELTIVRNYMLG
EMCRSYESPFSLSDAWIFIATSGLDDDYFSRSLLAVNEVTPMEIQDLAQRYLCKETLKEV
IAGKKLS