Protein Info for BACOVA_02462 in Bacteroides ovatus ATCC 8483

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 399 transmembrane" amino acids 9 to 28 (20 residues), see Phobius details amino acids 34 to 50 (17 residues), see Phobius details amino acids 59 to 78 (20 residues), see Phobius details amino acids 89 to 107 (19 residues), see Phobius details amino acids 114 to 134 (21 residues), see Phobius details amino acids 186 to 212 (27 residues), see Phobius details amino acids 223 to 243 (21 residues), see Phobius details amino acids 317 to 338 (22 residues), see Phobius details amino acids 350 to 370 (21 residues), see Phobius details amino acids 375 to 392 (18 residues), see Phobius details

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (399 amino acids)

>BACOVA_02462 hypothetical protein (Bacteroides ovatus ATCC 8483)
MNNAIVKRYPLANSFPILLIVCLILEQGYGLLPIPRYLFIVLVGVFFFYYKKGTSYSKPI
SIFVVSCFLSILSCMYFRNESPVSIMGEYNIYLMIVFYFVLCKYNVSIEVLEKVLFWAFI
IFCFCYLYQVSVYPKLVFLDKNNQYNETIDVLNRRIRMVGMSINSLGYFYSLNKILEKKM
NYTLPMLLSLVCMLLFGFRTLLFFSAVFSIIMIIRFNGFSKKLVFWCALGGLGAYLLYLT
PIFQTVFERMMERQESDQTFGNKDYIRYATLFHYYGNHYKSAVEVFLGSGLCNRALRTSY
SLEIVRNESYGLHYYDWGLLGISWMTGVLSLIGMLWWSLKAAFAKLPKKYLYLSVWFGYI
LTCAFTSAEFVRQGCFLIQAICLYLIYKISLYEKNRYNE