Protein Info for BACOVA_01962 in Bacteroides ovatus ATCC 8483

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 846 PF16378: DUF4988" amino acids 14 to 192 (179 residues), 122.9 bits, see alignment E=1.2e-39 PF16315: DUF4955" amino acids 692 to 845 (154 residues), 218 bits, see alignment E=6.7e-69

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (846 amino acids)

>BACOVA_01962 hypothetical protein (Bacteroides ovatus ATCC 8483)
MLAIMQSCQKTDDLEADINSLKDRVAALEKATEGLNTSFASLQALMQKNKVIIGITPTKD
GLGYLLELSDGTSIKVMESEAVQASVPEFSVDEEGYWIYKTSNNTNFKYLPGADGEKVSA
WPRDEEGNVVATPLISVSSSGYWQVSYDNGQTYTSLGTKAEGGSQGGTSIFSKVEYNEAN
HTFSFTLSDGGKTYTFPVDDTFGLIIYGLNDADSEQTVQVFAPNENHKEYKVEQNDVQQA
VVQAPKGWNVLLSENLLTITPQATATKDMEETIKIVLTSSKNYIRIVSIEVKQLSSEAGA
EAWQQFVNADQQNVLLDFSYAGYKHGEIAPPETETLIAQGYKVYDVTDPKYGAIPNDGKS
DRAAFMKVLEEIASETKQEDLNMTDRYIKENAKAIIYFPEGNYILQDEDSKDRRIRISMS
DIVLKGAGRNKTTLEMTAANNSPKPTEEMWNAPVMMEFKHNTGLKESIGVITEDAPIGSR
TITASLTGVSAGSWVCLVLENTDDNVINSELYPHKWEDIKIQQGGTPNIKTKGIQIYEYH
QIEKISGNSVTFKEPIMHAINKDWGWNVHKFANYANVGVEDLTFKGHAKEKFIHHGSDID
DGGFKLIDFVRLTNSWMRRVNFESVSEAMSITNSANCSAYDITIGGNRGHASIRSQASSR
IFIGKVTENSNGYTLRKGEGESTLMEYKTNVGQYHACGVSKQSMGAVIWNVRWGDDSCFE
SHATQPRATLIDCCSGGFMHWRQGGDSAQMPNHMENLTIWNFYATNAQTDQDIDTGGKFT
WWDGNGFWWKFMPPIIVGFHGSPLDFDDTQMKRLESNGTAVEPYSLYEAQLRKRLGYVPS
WLSSLK