Protein Info for BACOVA_01936 in Bacteroides ovatus ATCC 8483

Annotation: glycosyltransferase, group 2 family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 326 PF13641: Glyco_tranf_2_3" amino acids 7 to 121 (115 residues), 41.1 bits, see alignment E=2.8e-14 PF00535: Glycos_transf_2" amino acids 8 to 134 (127 residues), 127.6 bits, see alignment E=7.5e-41 PF10111: Glyco_tranf_2_2" amino acids 8 to 112 (105 residues), 43.3 bits, see alignment E=4.9e-15

Best Hits

KEGG orthology group: None (inferred from 52% identity to bth:BT_3370)

Predicted SEED Role

"putative glycosyltransferase yibD"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (326 amino acids)

>BACOVA_01936 glycosyltransferase, group 2 family protein (Bacteroides ovatus ATCC 8483)
MESQYSVSVIIPVHNTAPYLRRCIESVRNQTLKDIEIILVDNLSTDDSPSICDEYANIDS
RVKVLHLDEAGLSIARNAGIEIATAPYIGFIDSDDYIEPTMYENMLSVMVQNKVYMVYCN
FCFEYEDGRIEQMYPNTANVYVRTSQDVQRDIIFERVSSSACTKLFDKIFFDSYRFPVGM
FFEDHATIYRWISICDKIVWIDAAYYHYIQRGDSICHTINPIKRYHYFLAEYSRLEFAKE
RRLFEGRDWFDAVNVIVENCFNHFQGFMTDPNHQSYPVEIKDMRNKLSRWRFLSRKELSS
KYYKRLRKITYFWPIYYWTHFAKKKN