Protein Info for BACOVA_01783 in Bacteroides ovatus ATCC 8483
Annotation: indolepyruvate oxidoreductase subunit beta
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 37% identical to IORB_ARCFU: Indolepyruvate oxidoreductase subunit IorB (iorB) from Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
KEGG orthology group: K00180, indolepyruvate ferredoxin oxidoreductase, beta subunit [EC: 1.2.7.8] (inferred from 98% identity to bth:BT_0429)Predicted SEED Role
"Indolepyruvate oxidoreductase subunit IorB (EC 1.2.7.8)" in subsystem Aromatic amino acid interconversions with aryl acids (EC 1.2.7.8)
Isozymes
Compare fitness of predicted isozymes for: 1.2.7.8
Use Curated BLAST to search for 1.2.7.8
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (193 amino acids)
>BACOVA_01783 indolepyruvate oxidoreductase subunit beta (Bacteroides ovatus ATCC 8483) MKKDIILSGVGGQGILSIATVIGKAALKEGLYMKQAEVHGMSQRGGDVQSNLRISDQPIA SDLIPSGKCDLIISLEPMEGLRYLPYLSPNGWLVTNETPFVNIPNYPEADKVMAEINKLP HKIVLNVDKVAKEVGSARVANIVLLGATIPFLDIDYEKVQDSIREIFLRKGEAIVEMNLK ALAAGKEIAEKLM