Protein Info for BACOVA_01110 in Bacteroides ovatus ATCC 8483

Annotation: peptidase, S8/S53 family

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 454 signal peptide" amino acids 1 to 20 (20 residues), see Phobius details PF00082: Peptidase_S8" amino acids 169 to 438 (270 residues), 131.5 bits, see alignment E=1.9e-42

Best Hits

KEGG orthology group: None (inferred from 82% identity to bth:BT_3889)

Predicted SEED Role

"Subtilisin-like serine proteases"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (454 amino acids)

>BACOVA_01110 peptidase, S8/S53 family (Bacteroides ovatus ATCC 8483)
MKKFIVLILALNMYLGVFAQFTPGDTLKYRISLKDKAATDYSLQKPEKYLSKKSIERRKK
QGLPIDSTDLPVCRKYVDAIRKTGVHVLVTGKWDNFVTVSCNDSTLIDEIAKLPFVHSTE
RVWKGITQRAFQRDSLINKPVRTDSLYGPAITQAAMSRVDLLHDAGFKGQGMTIAVIDAG
FHNVDKIDAMKNIHILGVRDFVNPEADIYAESSHGMSVLSCMAMNQPHVMIGTAPEASYW
LLRSEDEYSENLVEQDYWAAAIEFADSVGVDLVNTSLGYYSFDDPAKNYRYRDLNGHYAL
MSREAAKAADKGMVVVCSAGNSGAGSWKKITPPGDAENIITVGAVNKRGELAPFSSVGNT
ADGRVKPDVVAVGLNSDVMGTDGNLRRANGTSFSSPIMCGMVACLWQACPKLTAKQIIDL
VRQSGDRADFPDNIYGYGIPDLWKAYLNFSSKEK