Protein Info for BACOVA_00873 in Bacteroides ovatus ATCC 8483

Annotation: biotin biosynthesis protein BioC

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 288 TIGR02072: malonyl-acyl carrier protein O-methyltransferase BioC" amino acids 9 to 219 (211 residues), 215.1 bits, see alignment E=6.6e-68 PF13489: Methyltransf_23" amino acids 22 to 147 (126 residues), 33.6 bits, see alignment E=4.6e-12 PF13649: Methyltransf_25" amino acids 46 to 137 (92 residues), 39.6 bits, see alignment E=1.1e-13 PF08241: Methyltransf_11" amino acids 48 to 141 (94 residues), 47.9 bits, see alignment E=2.7e-16

Best Hits

Predicted SEED Role

"Biotin synthesis protein BioC"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (288 amino acids)

>BACOVA_00873 biotin biosynthesis protein BioC (Bacteroides ovatus ATCC 8483)
MNKRLIAERFSKAITTYPKEANVQRQIAGKMIRLLTEHIPSPCSKVIEFGCGTGIYSRML
LQALRPEELLLNDLCPDMKYCCEDLLMKKQVSFLPGDAETVSFPTESTLITSCSALQWFE
SPENFFERCNTLLNNQGYFAFSTFGKENMKEIRELTGNGLPYRSREELEVALSPHFDILY
SEEELIPLSFEDPIKVLYHLKQTGVNGLSTQSSPTGKQENDLCSSDNNSKNNSRTNSKNN
SKNNLPQQQWTRRDLQLFCERYTQEFTQGTSVSLTYHPIYIIAKKKKV