Protein Info for BACOVA_00731 in Bacteroides ovatus ATCC 8483

Annotation: von Willebrand factor type A domain protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 327 transmembrane" amino acids 6 to 24 (19 residues), see Phobius details amino acids 51 to 72 (22 residues), see Phobius details amino acids 301 to 318 (18 residues), see Phobius details PF07584: BatA" amino acids 1 to 74 (74 residues), 55.1 bits, see alignment E=1.2e-18 PF00092: VWA" amino acids 89 to 279 (191 residues), 83.5 bits, see alignment E=3.3e-27 PF13519: VWA_2" amino acids 90 to 196 (107 residues), 72.9 bits, see alignment E=4.7e-24

Best Hits

KEGG orthology group: K07114, uncharacterized protein (inferred from 94% identity to bth:BT_0907)

Predicted SEED Role

"BatA (Bacteroides aerotolerance operon)"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (327 amino acids)

>BACOVA_00731 von Willebrand factor type A domain protein (Bacteroides ovatus ATCC 8483)
MVFANIEYLFLLLLLIPYIVWYILKQKKSEATLQISDARVYAHTPKSYKNYLLHVPFLLR
CLALVLVILVLARPQTTNKWQNSEIEGIDIMLAIDVSTSMLAEDLKPNRLEAAKDVAAEF
INGRPNDNIGITLFAGETFTQCPLTVDHAVLLDMIHNIKCGLITDGTAVGMGIANAVTRL
KDSKAKSKVIILLTDGTNNKGDISPMTAAEIAKSFGIRVYTIGVGTNGMAPYPYPVGNTV
QYVSMPVEIDEKTLTEIAGTTDGNYFRATSNSKLKEVYEEIDKLEKTKLNVKEYSKRDEE
YHWFALAAFLCVLLEVLLRNSVLKKIP