Protein Info for BACOVA_00602 in Bacteroides ovatus ATCC 8483

Annotation: phosphate ABC transporter, permease protein PstC

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 398 transmembrane" amino acids 12 to 32 (21 residues), see Phobius details amino acids 177 to 200 (24 residues), see Phobius details amino acids 216 to 239 (24 residues), see Phobius details amino acids 251 to 271 (21 residues), see Phobius details amino acids 299 to 320 (22 residues), see Phobius details amino acids 367 to 389 (23 residues), see Phobius details PF12849: PBP_like_2" amino acids 37 to 128 (92 residues), 29.5 bits, see alignment E=6.4e-11 TIGR02138: phosphate ABC transporter, permease protein PstC" amino acids 136 to 392 (257 residues), 283.6 bits, see alignment E=7.4e-89 PF00528: BPD_transp_1" amino acids 195 to 390 (196 residues), 75.9 bits, see alignment E=3.5e-25

Best Hits

KEGG orthology group: K02037, phosphate transport system permease protein (inferred from 93% identity to bth:BT_1323)

Predicted SEED Role

"Phosphate transport system permease protein PstC (TC 3.A.1.7.1)" in subsystem High affinity phosphate transporter and control of PHO regulon or Phosphate metabolism (TC 3.A.1.7.1)

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (398 amino acids)

>BACOVA_00602 phosphate ABC transporter, permease protein PstC (Bacteroides ovatus ATCC 8483)
MKKVFERIIEGMLTCSGFVTSITILLIVLFLFTEAFGLFKSKVIEEGYVLALNKSNKVSV
LSPAQIKNVFDEEITNWKELGGEDLPIRVFRLEDITQYYTEEELGPAYEYAGDKITELVE
KTPGIVAFVPQKFIVHPDAVHFIEDNTISVKDVFAGAEWFPTATPAAQFGFLPLITGTLW
VSLFAILFALPFGLSVSIYISEVANPKVRNWLKPIIELLSGIPSVVYGFFGLIVIVPLIQ
KLCNLPVGESGLAGSFVLAIMALPTIITVTEDAMRNCPRAMREASLALGASQWQTIYKVV
IPYSISGITSGVVLGIGRAIGETMAVLMVTGNAAVIPTTILEPLRTIPATIAAELGEAPA
GGPHYQALFLLGVVLFFITLIINFSVEYISSKGLKRSK