Protein Info for BACOVA_00483 in Bacteroides ovatus ATCC 8483

Annotation: LPXTG-motif cell wall anchor domain protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 681 transmembrane" amino acids 20 to 37 (18 residues), see Phobius details amino acids 59 to 82 (24 residues), see Phobius details amino acids 94 to 113 (20 residues), see Phobius details amino acids 125 to 144 (20 residues), see Phobius details amino acids 313 to 330 (18 residues), see Phobius details PF14293: YWFCY" amino acids 5 to 147 (143 residues), 158.5 bits, see alignment E=2.3e-50 PF02534: T4SS-DNA_transf" amino acids 159 to 557 (399 residues), 52.7 bits, see alignment E=6.7e-18 PF10412: TrwB_AAD_bind" amino acids 434 to 574 (141 residues), 33.1 bits, see alignment E=6.2e-12 PF12696: TraG-D_C" amino acids 461 to 572 (112 residues), 52.9 bits, see alignment E=7.4e-18

Best Hits

KEGG orthology group: None (inferred from 96% identity to bth:BT_2614)

Predicted SEED Role

"Putative mobilization protein BF0133" in subsystem Conjugative transposon, Bacteroidales

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (681 amino acids)

>BACOVA_00483 LPXTG-motif cell wall anchor domain protein (Bacteroides ovatus ATCC 8483)
MQQEDDLRALAKIMEFGRAVSIFLLVVHVYVYCYPSITSWNLNLEVIDKIIMNFNNTTGI
FNCVLWSKLAVTLLLAVSCLGTKGVKGEKITRHKIYAALFAGCILFFLNWWILDLSLPHT
AVTTLYVFTLVSGYLCLLMAGLWMSRLYRHNLMEDVFNLENESFQQETRLMENEYSVNLP
TKFQYQGRLNDGWINVVNPFRATIVLGTPGSGKSYAVVNNYIRQMISKGYSCYIYDYKFD
DLSVIAYNTLLNNMDKYKVKPKFYVINFDNPRKSHRCNPINPEFMTDISDAYEASYTIML
NLNKTWIEKQGDFFVESPIILLAAIIWYLKIYKNGIYCTFPHAVELLNKPYSDLFTILTS
YPELENYLSPFMDAWKSGAQDQLQGQIASAKIPLTRMISPQLYWAMTGNDFSLDINNPNE
PKLLCVGNNPDRQNIYSAALGLYNSRIVKLINKKGQLKSTVIIDELPTIYFRGLDNLIAT
ARSNKVAVCLGFQDFSQLNRDYGEKESKVVQNTVGNIFSGQVVGETARTLSERFGKVLQK
RQSVSINRQDVSTSINTQLDSLIPASKIANLSQGTFVGAVSDNFGEKIDQKIFHAEIIVD
HAKVSAEEKAYKPIPVINEFRDREGNDIMMQQIGRNYDRIKADAQAIINMEMERIKKDPE
LCKRLGLENKDDQKKKNGEQE