Protein Info for BACOVA_00399 in Bacteroides ovatus ATCC 8483

Annotation: amidohydrolase family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 445 TIGR00857: dihydroorotase, multifunctional complex type" amino acids 18 to 430 (413 residues), 299 bits, see alignment E=2.9e-93 PF01979: Amidohydro_1" amino acids 53 to 426 (374 residues), 75.8 bits, see alignment E=3.9e-25

Best Hits

KEGG orthology group: K01465, dihydroorotase [EC: 3.5.2.3] (inferred from 89% identity to bth:BT_0250)

Predicted SEED Role

"Dihydroorotase (EC 3.5.2.3)" in subsystem De Novo Pyrimidine Synthesis (EC 3.5.2.3)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.5.2.3

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (445 amino acids)

>BACOVA_00399 amidohydrolase family protein (Bacteroides ovatus ATCC 8483)
MKRTLIQNAVVVNEGRKVLGSVVIENEKIAEILVGEENATAPCDEIIDATGCYLLPGAID
EHVHFRDPGLTHKADITTESRAAAAGGVTSIMDMPNTNPQTTTLEALEEKFVLLGEKSAV
NYSCYFGATNNNYTQFAQLDKHRVCGVKLFMGSSTGNMLVDRMASLRNIFGGTDLLIAAH
CEDQGIIKENTDKYKKEYGDDVPLALHPLLRSEEACYRSSELAVQLARETNARLHIMHIS
TAKELSLFSNVPLVQKKITAEACVSHLLFTEEDYQTLGARIKCNPAIKTAQDRKALREAV
NSGLIDAIATDHAPHLLSEKEGGALKAMSGMPMIQFSLVSMLELTEKGVFTIEKVVEKMA
HAPAQMYEIQNRGFIRKGYQADLVLVRPGSEWTVTTDCILSKCKWSPLEGHTFDWKVEKT
FVNGHLLYNNGEIDETYRGQELRFR