Protein Info for BACOVA_00157 in Bacteroides ovatus ATCC 8483

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 533 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details PF12741: SusD-like" amino acids 29 to 528 (500 residues), 574.6 bits, see alignment E=2.3e-176 PF12771: SusD-like_2" amino acids 90 to 497 (408 residues), 259 bits, see alignment E=8e-81

Best Hits

KEGG orthology group: None (inferred from 51% identity to bth:BT_1281)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (533 amino acids)

>BACOVA_00157 hypothetical protein (Bacteroides ovatus ATCC 8483)
MKQVKSFLKIFSLGLLLVGGAACTGNFDEINRKEYEVTKDEQGRENYNIGSTLRGLQGLV
VPTKEHLYQFIEALAAGPFAGYYGTTLVRTDKFETYNPSVDWQDKTYGDIFTESYPLYRD
LQDQSDDPVALALAKLLRVAIMHRMTDMYGPIPYSKVIDEQGSVSLNVPYDSQEAVYKQM
LKELDEVSSVLKENLTIGSEAFRKFDDVYYGDVSKWYKFANSLKLRMAIRMVYVDPTTAQ
QVAQDAVDAGVITDNADNAEMKVEENRAAMVFNGWSDHRMGADLLCYMNGYQDPRREKMF
TQVEITETVGGKPTKVSGFAGIRIGIDVVNKESVIDRYSKPIISTASPYPWMNAAEVTFL
RAEGALRGWAMGGDAKSLYEEAIALSFEQYGLPATDALSYAANASNTPQAYTDPVDGTYS
AGAVSNLTVAWQEGDEYAEKNLERIITQKWIAMFPSTVEAWSEYRRTDYPHLLPVVVNNS
GGTIDDTKAKIRRLWYPPSEYSGNRQYILEAVGMLGGPDNGATSLWWDKKPRP