Protein Info for BACOVA_00042 in Bacteroides ovatus ATCC 8483

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 486 transmembrane" amino acids 28 to 45 (18 residues), see Phobius details signal peptide" amino acids 46 to 46 (1 residues), see Phobius details PF14298: DUF4374" amino acids 47 to 470 (424 residues), 568.4 bits, see alignment E=5.2e-175

Best Hits

KEGG orthology group: None (inferred from 54% identity to bsa:Bacsa_3368)

Predicted SEED Role

"FIG00898986: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (486 amino acids)

>BACOVA_00042 hypothetical protein (Bacteroides ovatus ATCC 8483)
MESSECFSVNNKSQFLVSINNKEYMKKFLLQAFAVAFCLGSGVFVASCDDDNNPVDNPPI
DGETAYVVAATTGEASYLVVANSLDEGTVSTQGNGTEVIGGTYWVYKGLDYVFALVYNKG
GAGTGASYYLGADGKMKEKYTYTYNRITSYGTWGDKVVTVSTGDSKITDEDQNVAQALLF
NYLDATDGSQEEGTLLAENYLGNGEKVSWAGLVEANNKIYTSVIPMGMSKYGIKKWPEAV
TDQELVTKTDGGSGSGAYTAGVIPSTQYPDNAYVAIYSGTNFNETPVIAKTDKIGYACGR
MRSQYYQTIWAADNGDVYVFSPGYGRTAVSSSDLKKVTGQKPSGAMRIKAGATDFDPDYY
VNFEEIGTKHPIFRCWHISEDYFLLQLYKKGAEDMINGGTSADVSELAVFKAEDQTIMPV
TGLPADGKFGGEPYGEKGYAYMAVTVTTGEKPAFYKIDAKTGKAVKGLTVEADAITTVGK
MEYLSK