Protein Info for B158DRAFT_2533 in Kangiella aquimarina DSM 16071

Annotation: Uncharacterized conserved protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 241 PF02578: Cu-oxidase_4" amino acids 20 to 238 (219 residues), 255.5 bits, see alignment E=2.2e-80 TIGR00726: YfiH family protein" amino acids 25 to 239 (215 residues), 202.6 bits, see alignment E=2.7e-64

Best Hits

Swiss-Prot: 48% identical to POLOX_ECOLI: Polyphenol oxidase (yfiH) from Escherichia coli (strain K12)

KEGG orthology group: K05810, conserved hypothetical protein (inferred from 74% identity to kko:Kkor_1083)

MetaCyc: 48% identical to purine nucleoside phosphorylase YfiH (Escherichia coli K-12 substr. MG1655)
Adenosine deaminase. [EC: 3.5.4.4]; S-methyl-5'-thioadenosine phosphorylase. [EC: 3.5.4.4, 2.4.2.28]; Purine-nucleoside phosphorylase. [EC: 3.5.4.4, 2.4.2.28, 2.4.2.1]; 2.4.2.1 [EC: 3.5.4.4, 2.4.2.28, 2.4.2.1]; Laccase. [EC: 3.5.4.4, 2.4.2.28, 2.4.2.1, 1.10.3.2]

Predicted SEED Role

"COG1496: Uncharacterized conserved protein"

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.10.3.2 or 2.4.2.1 or 2.4.2.28 or 3.5.4.4

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (241 amino acids)

>B158DRAFT_2533 Uncharacterized conserved protein (Kangiella aquimarina DSM 16071)
MIELIKPSWPAPVNIQAFSTTRVGGVSKAPFDSLNLGLHVGDDEVSVMTNRKRLQQLTTH
PPVQWLNQIHSSNVVEYSGTDQLVEADAIVTSQTSATCAVMTADCLPVLMTNSSGSWVAA
AHAGWRGLADGILLKTVASYDRPEPLMAWIGPAISQKCFEVGDEVKEAFLDLDASNQDYF
VQNNRGRWQADLAGLAKKQLESEGVAVYLSQLCTYENEQQFYSYRRDGGTGRMASMIWIS
E