Protein Info for B158DRAFT_2212 in Kangiella aquimarina DSM 16071

Annotation: Dipeptidyl aminopeptidases/acylaminoacyl-peptidases

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 629 PF20434: BD-FAE" amino acids 402 to 588 (187 residues), 47.3 bits, see alignment E=2.8e-16 PF00326: Peptidase_S9" amino acids 424 to 628 (205 residues), 182.5 bits, see alignment E=1.2e-57 PF01738: DLH" amino acids 534 to 612 (79 residues), 32.9 bits, see alignment E=7.6e-12

Best Hits

KEGG orthology group: None (inferred from 85% identity to kko:Kkor_0780)

Predicted SEED Role

"prolyl oligopeptidase family protein" in subsystem Synechocystis experimental

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (629 amino acids)

>B158DRAFT_2212 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases (Kangiella aquimarina DSM 16071)
MHKKTTPYGLWQSPISPEMLASKSTRYGQMQFIDDAIYWLESRPHEQGRGVIVRSRNGQR
EDVTPEGYNVRTRVHEYAGGDFWGRGEYLLFADDTNQQLCLQNLNTNNVDIITPEPPVKR
SLRYCDGEVAPNMAYTVCVHERHETDEVINELVVISLSAPYTKRVIAQGDDFYSNPRISP
DGKQLCWICWNHPNMPWDETELWLADISETGDISNSRKVAGGDHVSVYHPFWSADNQLFY
VADPKGWWHIYSLDNPDKPVHEQLEIEFGLPQWVFGCRTVQWFDDNSLVAIGTRKGQQAL
YQISLETAVVELFSDNWTAFNGQMVTGVNELYFMAANPQAGEAVYQVNLQNKKAHQLTEG
DKDQLEDFISVPQHIEFPTSGNQKAYGYFYPPKSPEFEAPTDEKPPLIVMSHGGPTGMTD
NGLNLTIQYWTSRGFAVADVNYRGSTGYGRAYRDSLKGQWGILDVDDCIAMGQHLAEQGL
IDGSRMAIRGGSAGGYTTLCALTFHDAFKAGMSRYGVAELVSLSQDSHKFEIRYLDSVVG
PYPECADLYHERSPVNHTELLSCPILILQGLEDKVVPPNQAEAMVKALKEKGLPYEYITF
EGEGHGFRKPETIIKAFTAELEFYQKHLL