Protein Info for B158DRAFT_2178 in Kangiella aquimarina DSM 16071

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 168 transmembrane" amino acids 12 to 34 (23 residues), see Phobius details amino acids 40 to 60 (21 residues), see Phobius details PF07254: Cpta_toxin" amino acids 20 to 158 (139 residues), 36.3 bits, see alignment E=2.9e-13

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (168 amino acids)

>B158DRAFT_2178 hypothetical protein (Kangiella aquimarina DSM 16071)
MNLFIDIGKSKGLIRIYIVFWTLLLASFILFIFSQFQLKTALILFLLSLIVSLPLVVWQI
KALNHLNKGVRQLQFIDGEWYLIQQHLGKEKKTAIEIENNNVLWPSWILLNYKSEIVLNG
KQPRLSSSRVKHKKRLLICRDAVSETEFRHLSRVLRYYRQDDDTVNQE