Protein Info for B158DRAFT_2074 in Kangiella aquimarina DSM 16071

Annotation: Outer membrane receptor for ferrienterochelin and colicins

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 712 signal peptide" amino acids 1 to 32 (32 residues), see Phobius details PF07715: Plug" amino acids 58 to 167 (110 residues), 77.4 bits, see alignment E=1.2e-25 PF00593: TonB_dep_Rec" amino acids 235 to 680 (446 residues), 71.8 bits, see alignment E=1.1e-23

Best Hits

KEGG orthology group: K02014, iron complex outermembrane recepter protein (inferred from 78% identity to kko:Kkor_0642)

Predicted SEED Role

"TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (712 amino acids)

>B158DRAFT_2074 Outer membrane receptor for ferrienterochelin and colicins (Kangiella aquimarina DSM 16071)
MSTGFLYEKIMAQKKLLVTLLALLLAPNGYAAEDTETTDLFGEELPTVLSATRLKQSQAE
TPASVTIIDRELIEASGARNIVEALRLVPGMNIGYISGNTPEVSIHGLHTDFSRRLQVLV
DGRSVFKPALSRVLWGNLTLSIDDVERIEVVRGPNTVTYGANSFLGVINIISRHPSDVAN
DQATVTLGNKGIADGSLRIAKQSEDFSYRMTVGRHSDDGFDLQRNGSERYDDHDTNYFRG
DMVFNPAHDQQWRLIFGYSQADEQQDLLDVYQTEPYHIKTTDDSFVQLIWDRQLSADHDI
KLNAHYSQDSIEEEWQTCPPALFFTNELGALYDYDPIYTDQLISAISSGSAIPTPGTPEA
ALLTQQVYDRFLELGASTVCGIANQNIDEDKWEIELQDTYTFNNNLRLVSGLSSRRDTIR
GESFFEKKLHNDIYRVFGNLEWRLAEDTLLNFGSMYEHDKFVGGEFSPRLALNYLATPSS
SWRFILAKGTRNPDFYEESGHRRYIVRNLTMPVNGSDTFATFYQTPQAMGNLEPETILSR
EIGWFYRLGSDLNFDIKFYYDDLNDTIDGLFGLEDYNPRNANSFKSKGVDMQLDYHLSSD
SRLWLSYSYQDIEVETGRSLRHQAPEQTASILFSHQLTEQLSFSSAYYLQDMERGADFKR
FDARLSQTLPIDDKELSLSLVIQHNINDRAYFDSSTVWDSKNIVYLKASLQF