Protein Info for B158DRAFT_2050 in Kangiella aquimarina DSM 16071

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 645 transmembrane" amino acids 248 to 267 (20 residues), see Phobius details amino acids 279 to 299 (21 residues), see Phobius details PF13304: AAA_21" amino acids 31 to 337 (307 residues), 38.2 bits, see alignment E=1.7e-13

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (645 amino acids)

>B158DRAFT_2050 hypothetical protein (Kangiella aquimarina DSM 16071)
MKIKQIQLNHVKSFDGIIECDFDKNTSIFSISGRNGAGKSTILKSAYLIQKAYFSNLLGQ
KYKEQFDIEARRFLNTDFSYIKLSMIEDEEEVTLTLSIEKKQIVLACDNDEFIKKYWNLR
SPENLILYIDASKGFSEETLQFNELNIADNNKIDLALEAVLRPEYLFSGIYRQLVKDHVH
GRLIPSKPDRLLYFRVASNMFTSLIPNVELKNFSGKHKSGEFVLLGKANSDKRKPLYDVR
EFSSGEKALLSTLSFLCISKSVCALFIDEPENHFHENLLLEFVSLLYALCQNGGLLGWTA
KETKSGNSLNLKEEWLEKEYRGHRLNQVVLSTHSKTLIYKIFTMGKNFIVSEGVKEINYD
DAENELRELGLSSVHSKVLLVEGSGDHESLEYILKGKNIKIKPLGGSREVIETFKKLVTL
REHIREMKFVFLVDSDNKPNEYFEKIRSLDADFYDNSFITLSKHEFENYLLDESIFEAVV
NKYLELSGEEHKKISGDEIKAKFVDFAESSLPQVYKKEMSLVLNHKIESFFSNRLWGNKS
FNWNSKERILNQINIKVLDDNSIQCLAEDLKLAISSVFELYEDGNEQVLLDRCDGKQVFG
KASGHFSNYAGVDTKVFKKAIYRHAVKVGNGQLSDLVGDISRKFD