Protein Info for B158DRAFT_2022 in Kangiella aquimarina DSM 16071

Annotation: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 475 PF01546: Peptidase_M20" amino acids 97 to 468 (372 residues), 70.7 bits, see alignment E=1.7e-23 PF07687: M20_dimer" amino acids 210 to 368 (159 residues), 28.2 bits, see alignment E=1.5e-10

Best Hits

KEGG orthology group: None (inferred from 93% identity to kko:Kkor_0589)

Predicted SEED Role

"Succinyl-diaminopimelate desuccinylase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (475 amino acids)

>B158DRAFT_2022 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases (Kangiella aquimarina DSM 16071)
MDTQKAQAFIDKKWDDEIVPELIEYIKIPNKSPHFDPKWDEHGYMEQAVQQIANWCEAQD
IPNKSLEIVRIPGRTPLIFMEIAASDGTNNPSDDTILMYGHLDKQPEMSGWEEDLGPWIP
VMRDNKLYGRGGADDGYAAYASLTALMAIQKQGLPHARTVVIIEACEESGSYDLPYYIDQ
LRDRIGEPSLVICLDSGAGNYEQLWCTMSLRGMASGTLKVDVLREGIHSGMGSGVVPSSF
RVIRQLLNRLEDDKSGRLLPKEFYADIPHQRLEQTLKVAEVLGDGIVEAYPFVEGVEPMA
ENNFERLLNRNWRPALSYTGASGMPEIENAGNVLRPTTSLKLSLRLPPTADSEKATEALK
RILTEDPPSNAKVSFEPDQAGDGWNAPDVAPWLADSLERGSQNVYGKPAMYMGEGGTIPF
MGMLGEKFPEAQFMITGVLGPNSNAHGPNEFLHIPFAKKLTTCVSQVIVDHYKRG