Protein Info for B158DRAFT_1755 in Kangiella aquimarina DSM 16071
Annotation: 3-oxoacyl-(acyl-carrier-protein) synthase III
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 60% identical to FABH_XANCP: 3-oxoacyl-[acyl-carrier-protein] synthase 3 (fabH) from Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25)
KEGG orthology group: K00648, 3-oxoacyl-[acyl-carrier-protein] synthase III [EC: 2.3.1.180] (inferred from 97% identity to kko:Kkor_1186)Predicted SEED Role
No annotation
MetaCyc Pathways
- superpathway of fatty acids biosynthesis (E. coli) (40/53 steps found)
- fatty acid biosynthesis initiation (type II) (3/3 steps found)
- superpathway of fatty acid biosynthesis I (E. coli) (12/16 steps found)
- superpathway of fatty acid biosynthesis initiation (4/5 steps found)
- superpathway of fatty acid biosynthesis II (plant) (30/43 steps found)
- streptorubin B biosynthesis (15/34 steps found)
KEGG Metabolic Maps
Isozymes
No predicted isozymesUse Curated BLAST to search for 2.3.1.180
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (320 amino acids)
>B158DRAFT_1755 3-oxoacyl-(acyl-carrier-protein) synthase III (Kangiella aquimarina DSM 16071) MKYSKILGMGSYLPEKVLTNADLEKMVDTTDKWITERTGIKKRHIAADDQSASDLGFEAA KKAIENSGIDASEIDMIVVGTATPDKMFPSVACYIGHALGIGGVPAFDITTACPGFVYGL SIADQFIKTGHRKNVLVVGTEVLSRLVNWDDRSTCVIFGDGAGAAVVTGSDEPGILSTHI HADGGYGDLLYCNNGLRGQLGEFPEPQIVMRGNEVFKVAVKTLSQIVDETLEANNMQKED IDWLIPHQANIRIIQATAKKLGASMDKVVVAVDRHGNTSSASIPLAMCEAIEDGRIKRGD VCLLESFGGGFTWGSALIRY