Protein Info for B158DRAFT_1750 in Kangiella aquimarina DSM 16071

Annotation: aminodeoxychorismate lyase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 284 transmembrane" amino acids 242 to 259 (18 residues), see Phobius details TIGR03461: aminodeoxychorismate lyase" amino acids 14 to 270 (257 residues), 204 bits, see alignment E=1.2e-64 PF01063: Aminotran_4" amino acids 36 to 256 (221 residues), 111.7 bits, see alignment E=2.6e-36

Best Hits

KEGG orthology group: K02619, 4-amino-4-deoxychorismate lyase [EC: 4.1.3.38] (inferred from 70% identity to kko:Kkor_1191)

Predicted SEED Role

"Aminodeoxychorismate lyase (EC 4.1.3.38)" in subsystem Chorismate: Intermediate for synthesis of PAPA antibiotics, PABA, anthranilate, 3-hydroxyanthranilate and more. or Folate Biosynthesis (EC 4.1.3.38)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 4.1.3.38

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (284 amino acids)

>B158DRAFT_1750 aminodeoxychorismate lyase (Kangiella aquimarina DSM 16071)
MNSKDINKSSNNTWLNGSPYHKVAIDDRGLLYGDSFFTTIKITDGRVEHWMLHSERLIES
ARRLGFPSPDLTLIEEELQAFVQEQSDITQSVDGVVRLTISRGSGVRGYKAPASPDVQRI
LSWAPINTSTTFDSGVSLSLCSTPPSLNPMLAGIKHCNRLAEVLAAEEISANCFDGIMSL
NDKVICGTKSNIYFYLNEQWQTPKLDLAGVNGTVRRWLLNNQHYFVESDITHKDMATARY
CLVSNAIVGIIPVCAIGATHYELFTGWQELAHSYRQSAFSECKQ