Protein Info for B158DRAFT_1666 in Kangiella aquimarina DSM 16071

Annotation: Calcium/calmodulin dependent protein kinase II Association.

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 235 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details PF08332: CaMKII_AD" amino acids 117 to 234 (118 residues), 32.7 bits, see alignment E=1.1e-11 PF14534: DUF4440" amino acids 121 to 228 (108 residues), 42.7 bits, see alignment E=1e-14 PF13474: SnoaL_3" amino acids 122 to 234 (113 residues), 43.8 bits, see alignment E=4.4e-15

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (235 amino acids)

>B158DRAFT_1666 Calcium/calmodulin dependent protein kinase II Association. (Kangiella aquimarina DSM 16071)
MKIINLSLAVLLISLNIVFSAQAHDPKEYMREAKKPDCTAMKNMDHSKMDVKGPVMQAMM
KQCMNEVHQNDGSHKGKSHGTDDEKKQQHSTDADDQHMTMESKESKTVHALMSGLKTEPA
KVVKEFHDAIRNGDGRLARSLLTDQVTIFEAGRVERSADEYAKHHMLSDIKFLKKMNIEL
LEHQVQVIGNAAISISRSRIIGKYDGKDKNNEGMETMVLEKQGSDWKIKHIHWSR