Protein Info for B158DRAFT_1665 in Kangiella aquimarina DSM 16071

Annotation: Uncharacterized protein involved in copper resistance

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 287 signal peptide" amino acids 1 to 32 (32 residues), see Phobius details PF05275: CopB" amino acids 83 to 287 (205 residues), 298 bits, see alignment E=1.8e-93

Best Hits

KEGG orthology group: K07233, copper resistance protein B (inferred from 76% identity to sde:Sde_1946)

Predicted SEED Role

"Copper resistance protein B" in subsystem Copper homeostasis

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (287 amino acids)

>B158DRAFT_1665 Uncharacterized protein involved in copper resistance (Kangiella aquimarina DSM 16071)
MRLKAIKKLMILSLKTVLLSSITMQFNYALAQADGMGQMQAQGGSAPADARDPHAYSDGY
TLTEGPYSQPGPRQLILADEYTFWAVLVDRLEYQNDSEATVYDFQAWYGTTYDRLVIKTE
GDIAEGRQEESSTDLLWGHALNAYFDTQLGVRIDQYYEGKDRQWLALGVQGLAPYWFELD
VTAYVGDNGRTALAAEAEYELLLTQRLILQPRAELNLYGKDDPENSLGSGLSDLSLGLRL
RYEFNRQFAPYIGMEWTRAFGDTADYWLAAGKERTETQIVAGFRFWF