Protein Info for B158DRAFT_1585 in Kangiella aquimarina DSM 16071

Annotation: Beta-glucosidase-related glycosidases

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 336 PF00933: Glyco_hydro_3" amino acids 10 to 291 (282 residues), 265.2 bits, see alignment E=4.9e-83

Best Hits

Swiss-Prot: 58% identical to NAGZ_IDILO: Beta-hexosaminidase (nagZ) from Idiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR)

KEGG orthology group: K01207, beta-N-acetylhexosaminidase [EC: 3.2.1.52] (inferred from 94% identity to kko:Kkor_1387)

MetaCyc: 56% identical to beta-N-acetylhexosaminidase (Pseudomonas aeruginosa PAO1)
Beta-N-acetylhexosaminidase. [EC: 3.2.1.52]

Predicted SEED Role

"Beta N-acetyl-glucosaminidase (EC 3.2.1.52)" (EC 3.2.1.52)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.2.1.52

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (336 amino acids)

>B158DRAFT_1585 Beta-glucosidase-related glycosidases (Kangiella aquimarina DSM 16071)
MSIGPLMLDVEGLEVNSRERDLLQNPLLGGIILFSRNYASPQQVAELSQSIREIANRDIL
IAVDHEGGRVQRFREGFTAVPAMGNILLENSDHEQAKRKAYQWGAMIAIEVQAVGIDFSF
APVLDLNKNISQVIGDRAFSGKVDEVIELGREFIRGMNDYGMATTAKHFPGHGSVEADSH
IDIPVDERPREQIISEDMRVFAELAQDYQAVMPAHVIYPAFDKQPAGFSSIWLQDILRSQ
LGFDGVIFSDDLSMKGAEVVGGYYQRAEAAIKAGCDMVLVCNHPKEGQELAKQFDFDCDP
KSAERLLTMKGKALNYSLTKVQGSDQWLELKDNLLA