Protein Info for B158DRAFT_1584 in Kangiella aquimarina DSM 16071

Annotation: Oligoendopeptidase F

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 625 signal peptide" amino acids 1 to 25 (25 residues), see Phobius details PF01401: Peptidase_M2" amino acids 45 to 625 (581 residues), 719.7 bits, see alignment E=1.5e-220

Best Hits

KEGG orthology group: K01283, peptidyl-dipeptidase A [EC: 3.4.15.1] (inferred from 93% identity to kko:Kkor_1388)

Predicted SEED Role

"Peptidyl-dipeptidase A precursor (EC 3.4.15.1)" (EC 3.4.15.1)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.4.15.1

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (625 amino acids)

>B158DRAFT_1584 Oligoendopeptidase F (Kangiella aquimarina DSM 16071)
MMKIRTAVSSAVLFSALLGLSACGDESADKQQTTEVKPAEAQVTVADAEKFVADSEKRLE
EISEYGARVAWVNANFVTYDTTQLNAKVGEEYTKLGVELANEAKKFNDLDLPYDLNRKLE
MIKLGLTLPAPSDEAKTKKLAEITSKLDSIYATGKSPDGRSLGQLSEVLRTSRDPQEQLE
AWLGWRTVSPEMRPLYEEMVQIANEGSKELGYKDTGAMWRSKYDMPADDFANEMDRLWGQ
VEPLYEALHCHVRAELNEEYGDEVVPLDQPIPAHLLGNMWAQQWGNIYDLVAPEGAGKGV
DLDPILRKHYGVDHEVVTYNEKEKAVKELVKTAENFFSSLGFAPLPETFWERSLFVKPRD
REVQCHASAWNLDNQEDIRIKMCTEINSEDFQTVHHELGHNYYQRAYKDQPILYKGSAND
GFHEAIGDTVALSITPAYLKQIGLIEEEPDASADIALLMRSALDKVAFLPFGLMVDKWRW
QVFNGEVSAAEYNQGWWNLRTQYQGIMPAVERTEADFDPGAKYHIPGNTPYSRYFLAHIL
QFQFFRDMCEMAGNEGPLHRCSFYGNKEVGAKLNAMLEMGASRPWQDALEAMTGQREMDA
TAVLEYYAPLKTWLDEQNKDRNCGW