Protein Info for B158DRAFT_1563 in Kangiella aquimarina DSM 16071

Annotation: Nucleotidyltransferase/DNA polymerase involved in DNA repair

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF00817: IMS
  • amino acids 17 to 164 (148 residues), 178 bits, E=1.7e-56
• PF11798: IMS_HHH
  • amino acids 176 to 207 (32 residues), 34.6 bits, see alignment (E = 2.1e-12)
• PF11799: IMS_C
  • amino acids 250 to 357 (108 residues), 41.1 bits, E=3.1e-14

Best Hits

Swiss-Prot: 60% identical to DPO4_PSEPF: DNA polymerase IV (dinB) from Pseudomonas fluorescens (strain Pf0-1)

KEGG orthology group: K02346, DNA polymerase IV [EC: 2.7.7.7] (inferred from 90% identity to kko:Kkor_1410)

Predicted SEED Role

"DNA polymerase IV (EC 2.7.7.7)" in subsystem DNA repair, bacterial (EC 2.7.7.7)

KEGG Metabolic Maps

• Purine metabolism
• Pyrimidine metabolism

Isozymes

Compare fitness of predicted isozymes for: 2.7.7.7

Use Curated BLAST to search for 2.7.7.7

Protein Sequence (369 amino acids)

>B158DRAFT_1563 Nucleotidyltransferase/DNA polymerase involved in DNA repair (Kangiella aquimarina DSM 16071)
MPDPVSDTQPIRKIIHVDMDCYYAAIEMRDEPSLKNQPVAVGGSPDKRGVIATCNYEARS
YGVRSAMPSAYARRLCPGLVIVHPNFDKYRHDSKVIREIFAQYTDLIEPLSLDEAYLDVT
ECTEYKGSATFIAQAIRYQIFEKLKLTASAGVAPNKFLAKIASDWNKPNGQFVITPEEVD
DFVKQLPVAKIHGVGKKTTEKLHRMGIENCKELREIDLLTLSKTFGSFGQRLYELSRGID
QRPVITHYPRKSLSVENTYDQDLITLEDCLDELPHLLQTLKRRVARSGVGAPINKLFAKL
KFSDFTATTVERTSFGINDDLFYELMEEGFHRRQKTVRLLGIGVRFQASESTNFVQLPLE
YSDLEDDFG