Protein Info for B158DRAFT_1470 in Kangiella aquimarina DSM 16071
Annotation: glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41)
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 54% identical to PROA_IDILO: Gamma-glutamyl phosphate reductase (proA) from Idiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR)
KEGG orthology group: K00147, glutamate-5-semialdehyde dehydrogenase [EC: 1.2.1.41] (inferred from 95% identity to kko:Kkor_1498)MetaCyc: 44% identical to glutamate-5-semialdehyde dehydrogenase (Escherichia coli K-12 substr. MG1655)
Glutamate-5-semialdehyde dehydrogenase. [EC: 1.2.1.41]
Predicted SEED Role
"Gamma-glutamyl phosphate reductase (EC 1.2.1.41)" in subsystem Proline Synthesis (EC 1.2.1.41)
MetaCyc Pathways
- L-proline biosynthesis I (from L-glutamate) (4/4 steps found)
- L-ornithine biosynthesis II (3/3 steps found)
- L-citrulline biosynthesis (5/8 steps found)
- L-Nδ-acetylornithine biosynthesis (4/7 steps found)
- superpathway of L-citrulline metabolism (7/12 steps found)
KEGG Metabolic Maps
Isozymes
No predicted isozymesUse Curated BLAST to search for 1.2.1.41
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (428 amino acids)
>B158DRAFT_1470 glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) (Kangiella aquimarina DSM 16071) MTMQEKSFESQEQQELYEMTMRAKQAAQTLGNLTSSQKNDVLAAMAKRLKANQDQILEAN KKDIEYAKENDLSDAMVDRLLLDEARVDGMVDALHNVMSLADPVGEMGPSTLRPNGIRVA KMRIPLGVVLMIYEARPNVAVEAAALTLKSGNVVILRGGKEAWHSNQALIQCWHDALSDC GLSKEMVCMVPSQSHEAVNHLLQFRDTIDLVIPRGGERLIRAVTDNSKIPVIQHFKGVCH LYVDKFADLDKAEKLLKDGKVSRPGVCNALESLVIHKDIANEFLKRVNKLGNEFGIQFKA DKDSAAQLDNATEASADDYHNEYLSLAMSVKQADSYDDAVAHILEHSSSHTEVIVTENID RGNEFVRRINSSVVMVNASSRFSDGGELGLGAEIGISTSKLHAYGPMGLVQLTTEKYVVT GQGQAKHY