Protein Info for B158DRAFT_1444 in Kangiella aquimarina DSM 16071

Annotation: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 645 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details PF14718: SLT_L" amino acids 406 to 472 (67 residues), 67.5 bits, see alignment E=9.4e-23 PF01464: SLT" amino acids 487 to 592 (106 residues), 104.1 bits, see alignment E=3.5e-34

Best Hits

KEGG orthology group: K08309, soluble lytic murein transglycosylase [EC: 3.2.1.-] (inferred from 83% identity to kko:Kkor_1521)

Predicted SEED Role

"Soluble lytic murein transglycosylase precursor (EC 3.2.1.-)" (EC 3.2.1.-)

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.2.1.-

Use Curated BLAST to search for 3.2.1.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (645 amino acids)

>B158DRAFT_1444 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) (Kangiella aquimarina DSM 16071)
MTMRTLLLVQLIAIITLFSTAQAKPAYTAEQQAFLDAEKALKQGKQQEYQKLKKSLVHYS
LLPYLEYQEIQESLNKNSQQQVDDFINKYESSPLSSRLRWDLIRELAKNKNYALLEQYYP
FGAVASYDCQILNHQLDQGKPIKELSEQIANLWNVSKSQPKECDKIFEKWIDNNQLQQDV
AYQRFYQTAHEGPIGLLNYLKRYLPRDEQYLADLWLKVRRNPKVVTRSNFFPGKKPNKEA
PILVYAVKRLAWGDREDAYNAWKRTQSRVPLAGAHKSDVERTLFLALATQNNPKAVDMAK
DKLKDLLDDELVNHWKLVTFLRTQDWQTITQLYELLPFDQQSSEQWRYWYAVALDELGQK
EEATILLTELAKERDYYGYKAAVRTKQPILLNHAPLIIPEEVMESVRQSANVERAKELYD
IERYLDATREWRSLLNQLKTPEEFQAAAVIANEWGWYNQSILTIARAQVWDDTDIRFPTA
FKEDYIKMGKQIQLPPHWLMGVARQESAYGPRAVSPAGAYGLMQIMPNTAQAFARKFQIP
YSHRSDLLDPSINIQMGSRYLQMRYEELEQNPVYASAAYNAGKSRIEEWKKYGRYPTEVW
IEAIPYTETRDYIKRVMTYRQVYALKLGLDDDIFEYILTTETGDK