Protein Info for B158DRAFT_1314 in Kangiella aquimarina DSM 16071

Annotation: Zn-dependent dipeptidase, microsomal dipeptidase homolog

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 422 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details PF01244: Peptidase_M19" amino acids 56 to 414 (359 residues), 321.4 bits, see alignment E=3.1e-100

Best Hits

KEGG orthology group: K01273, membrane dipeptidase [EC: 3.4.13.19] (inferred from 90% identity to kko:Kkor_0971)

Predicted SEED Role

"putative periplasmic dipeptidase"

MetaCyc Pathways

Isozymes

Compare fitness of predicted isozymes for: 3.4.13.19

Use Curated BLAST to search for 3.4.13.19

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (422 amino acids)

>B158DRAFT_1314 Zn-dependent dipeptidase, microsomal dipeptidase homolog (Kangiella aquimarina DSM 16071)
MKKTFLSTLVVAISLSALTACQQEESTEQPVNTEVVAEVKVAEKPVDYGVKAEAISKKYI
IADTHIDVPHRLLEKYDDVSMATEGGDFDYPRAVKGGLDAPFMSIYTPADLEEKGGSKEQ
AEQLIDMVEKMVADSPDKFALAMSPGDLLRNFRQGLISLPMGMENGSPLEGDLGNVEYFF
ERGIRYITLAHSLSNHLSDSSYDEARPNDGLSEFGREVVKEMNRLGMMVDVSHLSDKAFH
DVLEVSEVPVIASHSSARHFTPGFERNMSDEMIKALADNGGVIFINFGSTFVSQASRDNY
DAYKEARQQFMEENGVTAEHESVMEFTKQYRAEKPFEFADLEIVLDHFDHVIKLVGVDYV
GIGSDYDGVGDSLPTGLKDVATYPNLIEGLLVRGYSEEEIAKILSGNLLRVWTQVENHAQ
QQ