Protein Info for B158DRAFT_1180 in Kangiella aquimarina DSM 16071

Annotation: Uncharacterized protein conserved in bacteria

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 570 signal peptide" amino acids 1 to 33 (33 residues), see Phobius details transmembrane" amino acids 70 to 89 (20 residues), see Phobius details PF20142: Scaffold" amino acids 83 to 218 (136 residues), 83.2 bits, see alignment E=4.5e-27 PF01471: PG_binding_1" amino acids 272 to 305 (34 residues), 30.9 bits, see alignment (E = 3.7e-11) PF03734: YkuD" amino acids 333 to 496 (164 residues), 71.4 bits, see alignment E=1.9e-23

Best Hits

KEGG orthology group: None (inferred from 77% identity to kko:Kkor_1806)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (570 amino acids)

>B158DRAFT_1180 Uncharacterized protein conserved in bacteria (Kangiella aquimarina DSM 16071)
MWFWLMDCIRGCNFYLKVIVLSAALIYCQTLSAEMPPYVLLEPETNTADGSITEMEIKAN
LEFHQQTGFLPHLGVALANSSTLYGFYGLRGFRRLWSPLYREQDPIQELLKYLRQVDSHG
LLGSDYHLQPLTEHCQLPVPAAITECDLLQSDAILTLSQHLQIGKVNPNQLLKDTEVGKP
TTNLSDLLTRAASMPSLFDYFKEIEPHSQDYTGLRNYLSELRSRNAPQWPEIELQPSIKP
QMIDHRLVAIAERLMFWGDLPSDWSYLAPSPMVYEDDLIRAVEHFQKRHGLEADGVLGKK
TIAALNITPQQRIEQLVVNLEQIRWHELKPANRLIKVNIPSFELVALINNEEQLRMPVIV
GQLERQTPIFEDKIQYLVLNPNWVVPWELATKDKLPLIQENPQYLLDNRFSVYLNDFKIE
DPMQIDWKQVTKSRFPYRLVQEPGADNALGQVKFMFPNNYEVYLHDTPAKSLFKNDIRAF
SSGCIRVQEPMELLWWILRTNGLSDTDIENQLNKKHTNTVSLPLPVPIRLEYRTAYWGLD
QTIQFRTDIYQRDTKLYQALQQPATGILLR